RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 TMEM189A5PLL7 270 aa8.06□□□□□ -1.12
BRCA1-213ENST00000476777 ZNF705FA8MVS1 300 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-213ENST00000476777 ZNF705DP0CH99 300 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-213ENST00000476777 ZNF705BP0CI00 300 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-213ENST00000476777 FGF9P31371 208 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-213ENST00000476777 PPP5CP53041 499 aa8.06□□□□□ -1.12
BRCA1-213ENST00000476777 HERV-K104P61576 105 aa8.06□□□□□ -1.12
BRCA1-213ENST00000476777 NUTF2P61970 127 aaKnown RBP8.06□□□□□ -1.12
BRCA1-213ENST00000476777 PRCDQ00LT1 54 aa8.06□□□□□ -1.12
BRCA1-213ENST00000476777 TSPAN14Q8NG11 270 aa8.06□□□□□ -1.12
BRCA1-213ENST00000476777 DKK2Q9UBU2 259 aa8.06□□□□□ -1.12
BRCA1-213ENST00000476777 DAPK2Q9UIK4 370 aa8.06□□□□□ -1.12
BRCA1-213ENST00000476777 HELTA6NFD8 242 aa8.05□□□□□ -1.12
BRCA1-213ENST00000476777 H3BMM0 161 aa8.05□□□□□ -1.12
BRCA1-213ENST00000476777 FAM3BP58499 235 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-213ENST00000476777 ERHP84090 104 aaKnown RBP8.05□□□□□ -1.12
BRCA1-213ENST00000476777 DHRS2Q13268 280 aa8.05□□□□□ -1.12
BRCA1-213ENST00000476777 TBCEQ15813 527 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-213ENST00000476777 KCTD21Q4G0X4 260 aa8.05□□□□□ -1.12
BRCA1-213ENST00000476777 DHRS11Q6UWP2 260 aa8.05□□□□□ -1.12
BRCA1-213ENST00000476777 SEC22AQ96IW7 307 aa8.05□□□□□ -1.12
BRCA1-213ENST00000476777 NIPSNAP3BQ9BS92 247 aa8.05□□□□□ -1.12
BRCA1-213ENST00000476777 RNF167Q9H6Y7 350 aa8.05□□□□□ -1.12
BRCA1-213ENST00000476777 SMIM9A6NGZ8 99 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 RFX2P48378 723 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 HSPE1P61604 102 aaKnown RBP8.04□□□□□ -1.12
BRCA1-213ENST00000476777 OXA1LQ15070 435 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 FAM222AQ5U5X8 452 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 SFXN4Q6P4A7 337 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 TMEM88Q6PEY1 159 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 CMTM1Q8IZ96 169 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 C6orf223Q8N319 242 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 OR4A16Q8NH70 328 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 SLC25A38Q96DW6 304 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 YTHDF1Q9BYJ9 559 aaKnown RBP8.04□□□□□ -1.12
BRCA1-213ENST00000476777 VCXQ9H320 206 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 AUNIPQ9H7T9 357 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 EHFQ9NZC4 300 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 MRPL36Q9P0J6 103 aaKnown RBP8.04□□□□□ -1.12
BRCA1-213ENST00000476777 U3KQE9 123 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 FAT1Q14517 4588 aa8.04□□□□□ -1.12
BRCA1-213ENST00000476777 NBDYA0A0U1RRE5 68 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 TEX48A0A1B0GUV7 120 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 MEIS3P1A6NDR6 274 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 FAM90A26D6RGX4 464 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 CLN5O75503 358 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 HTN3P15516 51 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 SPINK9Q5DT21 86 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 H2BFWTQ7Z2G1 175 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 OR5H6Q8NGV6 325 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 GLMPQ8WWB7 406 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 NARS2Q96I59 477 aaKnown RBP8.03□□□□□ -1.12
BRCA1-213ENST00000476777 ZNF2Q9BSG1 426 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-213ENST00000476777 RRP15Q9Y3B9 282 aaKnown RBP8.03□□□□□ -1.12
BRCA1-213ENST00000476777 TMED3Q9Y3Q3 217 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 RFNGQ9Y644 331 aa8.03□□□□□ -1.12
BRCA1-213ENST00000476777 A0A0A6YYH2 397 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 A6NJ64 397 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 GPR31O00270 319 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 IGKV1-39P01597 117 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 IGKV1-17P01599 117 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 IGKV1D-39P04432 117 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 HLA-DRB4P13762 266 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 CBX5P45973 191 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 EIF2B2P49770 351 aaKnown RBP8.02□□□□□ -1.13
BRCA1-213ENST00000476777 SNRPD3P62318 126 aaKnown RBP8.02□□□□□ -1.13
BRCA1-213ENST00000476777 C16orf54Q6UWD8 224 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 SPATA12Q7Z6I5 190 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 TMEM230Q96A57 120 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 FXYD6Q9H0Q3 95 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 FNDC4Q9H6D8 234 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-213ENST00000476777 SEPSECSQ9HD40 501 aaKnown RBP8.02□□□□□ -1.13
BRCA1-213ENST00000476777 FAM212BQ9NTI7 297 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-213ENST00000476777 TXNL4BQ9NX01 149 aaKnown RBP8.02□□□□□ -1.13
BRCA1-213ENST00000476777 HLA-DRB4X5D2U9 266 aa8.02□□□□□ -1.13
BRCA1-213ENST00000476777 IGHV3OR16-12A0A075B7B8 117 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 INS-IGF2F8WCM5 200 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 SNCAP37840 140 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 AP2S1P53680 142 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-213ENST00000476777 AQP4P55087 323 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 SCAND1P57086 179 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 MLANAQ16655 118 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 TIGITQ495A1 244 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 PHLDA2Q53GA4 152 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 C15orf53Q8NAA6 179 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 OR4X1Q8NH49 305 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 ZNRF2Q8NHG8 242 aa8.01□□□□□ -1.13
BRCA1-213ENST00000476777 VPS13BQ7Z7G8 4022 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 PMP2P02689 132 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 RNASE2P10153 161 aaKnown RBP8□□□□□ -1.13
BRCA1-213ENST00000476777 FXYD7P58549 80 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 IZUMO4Q1ZYL8 232 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 GDF5OSQ5U4N7 250 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 MRGPRFQ96AM1 343 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 ATG101Q9BSB4 218 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 NRN1Q9NPD7 142 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 IFT46Q9NQC8 304 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 DIABLOQ9NR28 239 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 ANAPC10Q9UM13 185 aa8□□□□□ -1.13
BRCA1-213ENST00000476777 YTHDF2Q9Y5A9 579 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms