RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PQLC2Q6ZP29 291 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 SLC25A48Q6ZT89 311 aaKnown RBP5.56□□□□□ -1.52
UBR4-212ENST00000475973 MMD2Q8IY49 270 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 GCNT2Q8N0V5 402 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 C8orf31Q8N9H6 132 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 SLC24A4Q8NFF2 622 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 OR4A16Q8NH70 328 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 CMTM2Q8TAZ6 248 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 CACNG8Q8WXS5 425 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 STARD4Q96DR4 205 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 TMEM68Q96MH6 324 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 S1PR3Q99500 378 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 RAB9BQ9NP90 201 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 BET1LQ9NYM9 111 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 CALYQ9NYX4 217 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 C1RLQ9NZP8 487 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 MRPL27Q9P0M9 148 aaKnown RBP5.56□□□□□ -1.52
UBR4-212ENST00000475973 IL19Q9UHD0 177 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 FBXL7Q9UJT9 491 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 RNF114Q9Y508 228 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 ITPR2Q14571 2701 aa5.56□□□□□ -1.52
UBR4-212ENST00000475973 APCP25054 2843 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 IGHV3-43A0A0B4J1X8 118 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 M0R1X1 148 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 OVOL3O00110 214 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 TNFRSF13BO14836 293 aaPredicted RBP5.55□□□□□ -1.52
UBR4-212ENST00000475973 FOXH1O75593 365 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 SERF1AO75920 110 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 LYZL6O75951 148 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 MT-CO2P00403 227 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 CA2P00918 260 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 CRYGCP07315 174 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 FRMD6-AS1P0C7T7 363 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 IGHV3-43DP0DP04 118 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 RNASE2P10153 161 aaKnown RBP5.55□□□□□ -1.52
UBR4-212ENST00000475973 CRISP2P16562 243 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 GLRXP35754 106 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 TPPP2P59282 170 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 KLF5Q13887 457 aaPredicted RBP5.55□□□□□ -1.52
UBR4-212ENST00000475973 CLEC12BQ2HXU8 276 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 RPL39P5Q59GN2 51 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 UTF1Q5T230 341 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 TEX36Q5VZQ5 186 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 CST9LP1Q5W188 147 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 OR4A47Q6IF82 309 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 FAM71F2Q6NXP2 309 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 WDR73Q6P4I2 378 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 ZNF788Q6ZQV5 615 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 ZNF833PQ6ZTB9 187 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 NIT1Q86X76 327 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 Q8N1Y9 231 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 CNEP1R1Q8N9A8 125 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 THAP8Q8NA92 274 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 OR5B3Q8NH48 314 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 RFESDQ8TAC1 157 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 LINC01560Q8TB33 94 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 LRRC29Q8WV35 223 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 NRGNQ92686 78 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 SMIM12Q96EX1 92 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 ZNF714Q96N38 554 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 UHRF2Q96PU4 802 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 TBX15Q96SF7 602 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 RNF2Q99496 336 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 SLC25A33Q9BSK2 321 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 MRPL32Q9BYC8 188 aaKnown RBP5.55□□□□□ -1.52
UBR4-212ENST00000475973 COMMD5Q9GZQ3 224 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 HEYLQ9NQ87 328 aaPredicted RBP5.55□□□□□ -1.52
UBR4-212ENST00000475973 JKAMPQ9P055 326 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 RPUSD1Q9UJJ7 312 aaKnown RBP5.55□□□□□ -1.52
UBR4-212ENST00000475973 CDC42EP3Q9UKI2 254 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 PRNDQ9UKY0 176 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 KLF12Q9Y4X4 402 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 SVILO95425 2214 aa5.55□□□□□ -1.52
UBR4-212ENST00000475973 DIDO1Q9BTC0 2240 aaKnown RBP5.55□□□□□ -1.52
UBR4-212ENST00000475973 CSMD1Q96PZ7 3565 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 DNAJC13O75165 2243 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 TET2Q6N021 2002 aaPredicted RBP5.54□□□□□ -1.52
UBR4-212ENST00000475973 TEX50A0A1B0GTY4 177 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 SRRM4A7MD48 611 aaKnown RBP5.54□□□□□ -1.52
UBR4-212ENST00000475973 ZNF705GA8MUZ8 300 aaPredicted RBP5.54□□□□□ -1.52
UBR4-212ENST00000475973 GGTLC3B5MD39 225 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 C22orf46C9J442 243 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 BMPR1BO00238 502 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 DLEU1O43261 78 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 TFF1P04155 84 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 LINC00614P0C842 121 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 SAA2P0DJI9 122 aaPredicted RBP5.54□□□□□ -1.52
UBR4-212ENST00000475973 CT45A6P0DMU7 189 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 CT45A5P0DMU8 189 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 CT45A7P0DMV0 189 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 CBLN1P23435 193 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 BRS3P32247 399 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 ZNF137PP52743 207 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 PRRX1P54821 245 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 UBE2G2P60604 165 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 ERVK-16P61578 105 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 RPS16P62249 146 aaKnown RBP5.54□□□□□ -1.52
UBR4-212ENST00000475973 CD69Q07108 199 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 RAB31Q13636 194 aa5.54□□□□□ -1.52
UBR4-212ENST00000475973 MRGPRG-AS1Q2M3A8 158 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms