RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 SAP30O75446 220 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 ORM2P19652 201 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 DLX6P56179 175 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 SRSF9Q13242 221 aaKnown RBP eCLIP4.62□□□□□ -1.67
CBWD1-212ENST00000475411 SP6Q3SY56 376 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 Q5BKY6 102 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 SEM1Q6ZVN7 128 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 ARL17AQ8IVW1 177 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 BOD1L2Q8IYS8 172 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 KLHL30-AS1Q8NEE0 82 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 GALNT14Q96FL9 552 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 HDHD3Q9BSH5 251 aaPredicted RBP4.62□□□□□ -1.67
CBWD1-212ENST00000475411 FBLN5Q9UBX5 448 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 ZNF257Q9Y2Q1 563 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 COL4A2P08572 1712 aa4.62□□□□□ -1.67
CBWD1-212ENST00000475411 GTF3C1Q12789 2109 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 PPP1R1AQ13522 171 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 TMEM42Q69YG0 159 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 SCGB1D4Q6XE38 83 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 TMEM91Q6ZNR0 172 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 LYZL4Q96KX0 146 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 C16orf92Q96LL3 132 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 SPAG8Q99932 426 aaPredicted RBP4.61□□□□□ -1.67
CBWD1-212ENST00000475411 PRDM13Q9H4Q3 707 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 C21orf62Q9NYP8 219 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 TECRQ9NZ01 308 aaKnown RBP4.61□□□□□ -1.67
CBWD1-212ENST00000475411 OR2J3O76001 311 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 GCSHP23434 173 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 SRSF4Q08170 494 aaKnown RBP4.61□□□□□ -1.67
CBWD1-212ENST00000475411 KLRD1Q13241 179 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 GVQW1Q8N7I0 195 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 KCNK15Q9H427 330 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 TMEM167BQ9NRX6 74 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 TMEM56-RWDD3S4R434 201 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 USF3Q68DE3 2245 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 IGKV3-7A0A075B6H7 116 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 A0A1W2PP11 408 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 C19orf84I3L1E1 186 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 COX6CP09669 75 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 EGR1P18146 543 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 ANOS1P23352 680 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 SLAQ13239 276 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 C1orf194Q5T5A4 169 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 OR11H4Q8NGC9 324 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 OR2K2Q8NGT1 345 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 OR10AG1Q8NH19 301 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 MRPL30Q8TCC3 161 aaKnown RBP4.61□□□□□ -1.67
CBWD1-212ENST00000475411 PNRC2Q9NPJ4 139 aaKnown RBP4.61□□□□□ -1.67
CBWD1-212ENST00000475411 SPANXCQ9NY87 97 aa4.61□□□□□ -1.67
CBWD1-212ENST00000475411 PKDREJQ9NTG1 2253 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 FGF16O43320 207 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 MMP9P14780 707 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 TFPI2P48307 235 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 MORN2Q502X0 79 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 C10orf113Q5VZT2 155 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 MRPL54Q6P161 138 aaKnown RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 TEPPQ6URK8 271 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 OR4X1Q8NH49 305 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 PLPPR1Q8TBJ4 325 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 RGP1Q92546 391 aaPredicted RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 KLHDC3Q9BQ90 382 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 ARID1AO14497 2285 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 IGHV1-3A0A0C4DH29 117 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 FAM223BA6NKX1 122 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 BUB1B-PAK6H3BSN5 160 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 MPDU1O75352 247 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 HLA-DRB1P01911 266 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 APCSP02743 223 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 APELAP0DMC3 54 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 MDKP21741 143 aaPredicted RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 IER3P46695 156 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 RPL15P61313 204 aaKnown RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 INSL4Q14641 139 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 SRSF7Q16629 238 aaKnown RBP eCLIP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 POU2AF1Q16633 256 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 HCP5Q6MZN7 132 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 FAM223AQ8IWN6 122 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 H1FOOQ8IZA3 346 aaPredicted RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 CST9LQ9H4G1 147 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 IGF2RP11717 2491 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 SAA2-SAA4A0A096LPE2 208 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 H3BP45 60 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 PRSS1P07477 247 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 SAA2P0DJI9 122 aaPredicted RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 P2RY1P47900 373 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 PYY3Q5JQD4 70 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 LYPD2Q6UXB3 125 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 SRSF12Q8WXF0 261 aaKnown RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 PPP1R3EQ9H7J1 279 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 SEPSECSQ9HD40 501 aaKnown RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 TCF19Q9Y242 345 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 SPINK4O60575 86 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 PGLYRP1O75594 196 aaPredicted RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 ELANEP08246 267 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 RPL39P5Q59GN2 51 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 LCN12Q6JVE5 192 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 SPSB3Q6PJ21 355 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 SLC25A48Q6ZT89 311 aaKnown RBP4.6□□□□□ -1.67
CBWD1-212ENST00000475411 C1QL4Q86Z23 238 aa4.6□□□□□ -1.67
CBWD1-212ENST00000475411 CD177Q8N6Q3 437 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms