RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 FAM222AQ5U5X8 452 aa12.68□□□□□ -0.38
RNF220-212ENST00000475378 U3KQE9 123 aa12.68□□□□□ -0.38
RNF220-212ENST00000475378 TRAV18A0A075B6X5 111 aa12.67□□□□□ -0.38
RNF220-212ENST00000475378 TBCEQ15813 527 aaPredicted RBP12.67□□□□□ -0.38
RNF220-212ENST00000475378 TMEM88Q6PEY1 159 aa12.67□□□□□ -0.38
RNF220-212ENST00000475378 DHRS11Q6UWP2 260 aa12.67□□□□□ -0.38
RNF220-212ENST00000475378 TSPAN14Q8NG11 270 aa12.67□□□□□ -0.38
RNF220-212ENST00000475378 SEC22AQ96IW7 307 aa12.67□□□□□ -0.38
RNF220-212ENST00000475378 YTHDF1Q9BYJ9 559 aaKnown RBP12.67□□□□□ -0.38
RNF220-212ENST00000475378 MRPL36Q9P0J6 103 aaKnown RBP12.67□□□□□ -0.38
RNF220-212ENST00000475378 DAPK2Q9UIK4 370 aa12.67□□□□□ -0.38
RNF220-212ENST00000475378 FAT1Q14517 4588 aa12.66□□□□□ -0.38
RNF220-212ENST00000475378 NBDYA0A0U1RRE5 68 aa12.66□□□□□ -0.38
RNF220-212ENST00000475378 TEX48A0A1B0GUV7 120 aa12.66□□□□□ -0.38
RNF220-212ENST00000475378 HSPE1P61604 102 aaKnown RBP12.66□□□□□ -0.38
RNF220-212ENST00000475378 ERHP84090 104 aaKnown RBP12.66□□□□□ -0.38
RNF220-212ENST00000475378 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
RNF220-212ENST00000475378 SLC25A38Q96DW6 304 aa12.66□□□□□ -0.38
RNF220-212ENST00000475378 HTN3P15516 51 aa12.65□□□□□ -0.38
RNF220-212ENST00000475378 SPATA12Q7Z6I5 190 aa12.65□□□□□ -0.38
RNF220-212ENST00000475378 OR4A16Q8NH70 328 aa12.65□□□□□ -0.38
RNF220-212ENST00000475378 ZNRF2Q8NHG8 242 aa12.65□□□□□ -0.38
RNF220-212ENST00000475378 TMED3Q9Y3Q3 217 aa12.65□□□□□ -0.38
RNF220-212ENST00000475378 RFNGQ9Y644 331 aa12.65□□□□□ -0.38
RNF220-212ENST00000475378 MYCBP2O75592 4640 aa12.65□□□□□ -0.39
RNF220-212ENST00000475378 FAM90A26D6RGX4 464 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 CLN5O75503 358 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 IGKV1-39P01597 117 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 IGKV1D-39P04432 117 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 HLA-DRB4P13762 266 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 SFXN4Q6P4A7 337 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 C16orf54Q6UWD8 224 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 OR5H6Q8NGV6 325 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 NARS2Q96I59 477 aaKnown RBP12.64□□□□□ -0.39
RNF220-212ENST00000475378 ZNF2Q9BSG1 426 aaPredicted RBP12.64□□□□□ -0.39
RNF220-212ENST00000475378 FXYD6Q9H0Q3 95 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 AUNIPQ9H7T9 357 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 SEPSECSQ9HD40 501 aaKnown RBP12.64□□□□□ -0.39
RNF220-212ENST00000475378 FAM212BQ9NTI7 297 aaPredicted RBP12.64□□□□□ -0.39
RNF220-212ENST00000475378 EHFQ9NZC4 300 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 HLA-DRB4X5D2U9 266 aa12.64□□□□□ -0.39
RNF220-212ENST00000475378 INS-IGF2F8WCM5 200 aa12.63□□□□□ -0.39
RNF220-212ENST00000475378 IGKV1-17P01599 117 aa12.63□□□□□ -0.39
RNF220-212ENST00000475378 RFX2P48378 723 aa12.63□□□□□ -0.39
RNF220-212ENST00000475378 EIF2B2P49770 351 aaKnown RBP12.63□□□□□ -0.39
RNF220-212ENST00000475378 SPINK9Q5DT21 86 aa12.63□□□□□ -0.39
RNF220-212ENST00000475378 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
RNF220-212ENST00000475378 CMTM1Q8IZ96 169 aa12.63□□□□□ -0.39
RNF220-212ENST00000475378 C15orf53Q8NAA6 179 aa12.63□□□□□ -0.39
RNF220-212ENST00000475378 FNDC4Q9H6D8 234 aaPredicted RBP12.63□□□□□ -0.39
RNF220-212ENST00000475378 RRP15Q9Y3B9 282 aaKnown RBP12.63□□□□□ -0.39
RNF220-212ENST00000475378 IGHV3OR16-12A0A075B7B8 117 aa12.62□□□□□ -0.39
RNF220-212ENST00000475378 A0A0A6YYH2 397 aa12.62□□□□□ -0.39
RNF220-212ENST00000475378 MEIS3P1A6NDR6 274 aa12.62□□□□□ -0.39
RNF220-212ENST00000475378 A6NJ64 397 aa12.62□□□□□ -0.39
RNF220-212ENST00000475378 GPR31O00270 319 aa12.62□□□□□ -0.39
RNF220-212ENST00000475378 CBX5P45973 191 aa12.62□□□□□ -0.39
RNF220-212ENST00000475378 AP2S1P53680 142 aaPredicted RBP12.62□□□□□ -0.39
RNF220-212ENST00000475378 SNRPD3P62318 126 aaKnown RBP12.62□□□□□ -0.39
RNF220-212ENST00000475378 OR4X1Q8NH49 305 aa12.62□□□□□ -0.39
RNF220-212ENST00000475378 TMEM230Q96A57 120 aa12.62□□□□□ -0.39
RNF220-212ENST00000475378 VCXQ9H320 206 aa12.62□□□□□ -0.39
RNF220-212ENST00000475378 TXNL4BQ9NX01 149 aaKnown RBP12.62□□□□□ -0.39
RNF220-212ENST00000475378 RNASE2P10153 161 aaKnown RBP12.61□□□□□ -0.39
RNF220-212ENST00000475378 SCAND1P57086 179 aa12.61□□□□□ -0.39
RNF220-212ENST00000475378 FXYD7P58549 80 aa12.61□□□□□ -0.39
RNF220-212ENST00000475378 KRTAP10-2P60368 255 aa12.61□□□□□ -0.39
RNF220-212ENST00000475378 MLANAQ16655 118 aa12.61□□□□□ -0.39
RNF220-212ENST00000475378 GDF5OSQ5U4N7 250 aa12.61□□□□□ -0.39
RNF220-212ENST00000475378 ANAPC10Q9UM13 185 aa12.61□□□□□ -0.39
RNF220-212ENST00000475378 EPM2AB3EWF7 344 aa12.6□□□□□ -0.39
RNF220-212ENST00000475378 CORTO00230 105 aa12.6□□□□□ -0.39
RNF220-212ENST00000475378 SNCAP37840 140 aa12.6□□□□□ -0.39
RNF220-212ENST00000475378 TIGITQ495A1 244 aa12.6□□□□□ -0.39
RNF220-212ENST00000475378 ZNF709Q8N972 641 aa12.6□□□□□ -0.39
RNF220-212ENST00000475378 MRGPRFQ96AM1 343 aa12.6□□□□□ -0.39
RNF220-212ENST00000475378 ATG101Q9BSB4 218 aa12.6□□□□□ -0.39
RNF220-212ENST00000475378 NRN1Q9NPD7 142 aa12.6□□□□□ -0.39
RNF220-212ENST00000475378 YTHDF2Q9Y5A9 579 aaKnown RBP12.6□□□□□ -0.39
RNF220-212ENST00000475378 HNRNPCP07910 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNF220-212ENST00000475378 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
RNF220-212ENST00000475378 IZUMO4Q1ZYL8 232 aa12.59□□□□□ -0.39
RNF220-212ENST00000475378 PHLDA2Q53GA4 152 aa12.59□□□□□ -0.39
RNF220-212ENST00000475378 VPS13BQ7Z7G8 4022 aa12.59□□□□□ -0.39
RNF220-212ENST00000475378 PMP2P02689 132 aa12.58□□□□□ -0.4
RNF220-212ENST00000475378 INAFM2P0DMQ5 153 aa12.58□□□□□ -0.4
RNF220-212ENST00000475378 RPL5P46777 297 aaKnown RBP12.58□□□□□ -0.4
RNF220-212ENST00000475378 AQP4P55087 323 aa12.58□□□□□ -0.4
RNF220-212ENST00000475378 DEFB1P60022 68 aa12.58□□□□□ -0.4
RNF220-212ENST00000475378 DAD1P61803 113 aa12.58□□□□□ -0.4
RNF220-212ENST00000475378 TBC1D26Q86UD7 250 aa12.58□□□□□ -0.4
RNF220-212ENST00000475378 C1orf158Q8N1D5 194 aa12.58□□□□□ -0.4
RNF220-212ENST00000475378 IFT46Q9NQC8 304 aa12.58□□□□□ -0.4
RNF220-212ENST00000475378 LOC102723971A0A1B0GUV8 181 aa12.57□□□□□ -0.4
RNF220-212ENST00000475378 IGKV3-20P01619 116 aa12.57□□□□□ -0.4
RNF220-212ENST00000475378 OPRK1P41145 380 aa12.57□□□□□ -0.4
RNF220-212ENST00000475378 CLUHP3Q96NS8 147 aa12.57□□□□□ -0.4
RNF220-212ENST00000475378 DIABLOQ9NR28 239 aa12.57□□□□□ -0.4
RNF220-212ENST00000475378 FLG2Q5D862 2391 aaPredicted RBP12.56□□□□□ -0.4
RNF220-212ENST00000475378 TRAV30A0A087WSZ9 112 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms