RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 MLLT11Q13015 90 aaPredicted RBP5.44□□□□□ -1.54
USP54-211ENST00000474929 TIMM50Q3ZCQ8 353 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 TMEM91Q6ZNR0 172 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 SCXQ7RTU7 201 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 VKORC1L1Q8N0U8 176 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 C10orf126Q8N4M7 172 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 LRTM2Q8N967 370 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 C5orf30Q96GV9 206 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 TSC22D3Q99576 134 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 SCPEP1Q9HB40 452 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 HRASLSQ9HDD0 168 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 VCX3AQ9NNX9 186 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 ACOT13Q9NPJ3 140 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 BLOC1S6Q9UL45 172 aa5.44□□□□□ -1.54
USP54-211ENST00000474929 AK6Q9Y3D8 172 aaKnown RBP5.44□□□□□ -1.54
USP54-211ENST00000474929 TRAV26-1A0A087WT03 109 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 TRBV6-7A0A0A0MS04 114 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 IGHV3-66A0A0C4DH42 116 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 IGKV1-6A0A0C4DH72 117 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 CGB1A6NKQ9 187 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 M0QYG6 137 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 HTR2CP28335 458 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 FABP5Q01469 135 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 P2RY14Q15391 338 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 TDRG1Q3Y452 100 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 TOMM20LQ6UXN7 152 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 SPARTQ8N0X7 666 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 CYYR1Q96J86 154 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 KCNK15Q9H427 330 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 PLGRKTQ9HBL7 147 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 CACNG5Q9UF02 275 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 AK3Q9UIJ7 227 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 LY96Q9Y6Y9 160 aa5.43□□□□□ -1.54
USP54-211ENST00000474929 IGHV3-21A0A0B4J1V1 117 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 FAM90A26D6RGX4 464 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 TNFAIP8O95379 198 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 BPNT1O95861 308 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 APOHP02749 345 aaPredicted RBP5.42□□□□□ -1.54
USP54-211ENST00000474929 UCHL1P09936 223 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 TRAPPC2P0DI81 140 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 TRAPPC2BP0DI82 140 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 CRYBB3P26998 211 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 PSMB9P28065 219 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 NPBWR1P48145 328 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 CLDN12P56749 244 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 OR5I1Q13606 314 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 TRAM1Q15629 374 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 OR2B11Q5JQS5 317 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 C1orf100Q5SVJ3 147 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 FOXI2Q6ZQN5 318 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 C1orf158Q8N1D5 194 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 ZNF709Q8N972 641 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 HSD17B11Q8NBQ5 300 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 OR1P1Q8NH06 330 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 TCTEX1D2Q8WW35 142 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 PHYHIPQ92561 330 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 ABHD1Q96SE0 405 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 GPHA2Q96T91 129 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 GFI1Q99684 422 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 CMSS1Q9BQ75 279 aaKnown RBP5.42□□□□□ -1.54
USP54-211ENST00000474929 URM1Q9BTM9 101 aaKnown RBP5.42□□□□□ -1.54
USP54-211ENST00000474929 DPH3P1Q9H4G8 78 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 ZFAND3Q9H8U3 227 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 NRN1Q9NPD7 142 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
USP54-211ENST00000474929 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 SMIM30A4D0T7 59 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 ZNF701M0R085 212 aaPredicted RBP5.41□□□□□ -1.54
USP54-211ENST00000474929 ARL6IP5O75915 188 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 NXPH4O95158 308 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 IGLV2-11P01706 119 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 EVI2AP22794 236 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 PSMA1P25786 263 aaKnown RBP5.41□□□□□ -1.54
USP54-211ENST00000474929 RPL5P46777 297 aaKnown RBP5.41□□□□□ -1.54
USP54-211ENST00000474929 OR10A3P58181 314 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 TAS2R31P59538 309 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 GABARAPL2P60520 117 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 PSG9Q00887 426 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 UNC119Q13432 240 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 TBCEQ15813 527 aaPredicted RBP5.41□□□□□ -1.54
USP54-211ENST00000474929 RAB11BQ15907 218 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 C2orf76Q3KRA6 126 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 HES5Q5TA89 166 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 C22orf42Q6IC83 251 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 SLC25A46Q96AG3 418 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 MOB3AQ96BX8 217 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 IGF2BP2-AS1Q96M15 143 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 TMEM56Q96MV1 263 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 LINC00467Q9BRT7 94 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 CHAC1Q9BUX1 264 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 SAV1Q9H4B6 383 aaPredicted RBP5.41□□□□□ -1.54
USP54-211ENST00000474929 RBMX2Q9Y388 322 aaKnown RBP5.41□□□□□ -1.54
USP54-211ENST00000474929 TIMM8BQ9Y5J9 83 aaPredicted RBP5.41□□□□□ -1.54
USP54-211ENST00000474929 V9GY05 133 aa5.41□□□□□ -1.54
USP54-211ENST00000474929 A0A0B4J293 547 aa5.4□□□□□ -1.54
USP54-211ENST00000474929 TRDV1A0A1B0GX56 115 aa5.4□□□□□ -1.54
USP54-211ENST00000474929 DBX1A6NMT0 343 aa5.4□□□□□ -1.54
USP54-211ENST00000474929 SOCS1O15524 211 aa5.4□□□□□ -1.54
USP54-211ENST00000474929 RBFOX2O43251 390 aaKnown RBP eCLIP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms