RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 BSCL2Q96G97 398 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-204ENST00000474644 RPS10-NUDT3A0A1W2PQS6 291 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 OR2C1O95371 312 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 ADMP35318 185 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 SYNJ2BPP57105 145 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 MLANAQ16655 118 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 SAMD5Q5TGI4 173 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 ACSM6Q6P461 480 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 TXN2Q99757 166 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 CHRDL1Q9BU40 450 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 MCRIP2Q9BUT9 160 aaKnown RBP12.05□□□□□ -0.48
COL1A1-204ENST00000474644 GAR1Q9NY12 217 aaKnown RBP12.05□□□□□ -0.48
COL1A1-204ENST00000474644 MRPL36Q9P0J6 103 aaKnown RBP12.05□□□□□ -0.48
COL1A1-204ENST00000474644 TGP01266 2768 aa12.05□□□□□ -0.48
COL1A1-204ENST00000474644 SEC14L6B5MCN3 397 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 G3V4G9 280 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 K7EPK0 472 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 WIPF1O43516 503 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 IFNA4P05014 189 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 PAX9P55771 341 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 RPP30P78346 268 aaKnown RBP12.04□□□□□ -0.48
COL1A1-204ENST00000474644 OXLD1Q5BKU9 147 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 SPANXN5Q5MJ07 72 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 SPSB3Q6PJ21 355 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 SMIM8Q96KF7 97 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 RAB40CQ96S21 281 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 MGAT4CQ9UBM8 478 aa12.04□□□□□ -0.48
COL1A1-204ENST00000474644 PAIP2BQ9ULR5 123 aaKnown RBP12.04□□□□□ -0.48
COL1A1-204ENST00000474644 LSM5Q9Y4Y9 91 aaKnown RBP12.04□□□□□ -0.48
COL1A1-204ENST00000474644 GNG7O60262 68 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 CTSGP08311 255 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 SLC25A4P12235 298 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 NPBWR1P48145 328 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 H2BFSP57053 126 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 S100A10P60903 97 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 RAB11AP62491 216 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 CD69Q07108 199 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 PRSS54Q6PEW0 395 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 SLC16A13Q7RTY0 426 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 GPHB5Q86YW7 130 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 OR9G4Q8NGQ1 327 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 OR4X1Q8NH49 305 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 PSENENQ9NZ42 101 aa12.03□□□□□ -0.48
COL1A1-204ENST00000474644 STRAPQ9Y3F4 350 aaKnown RBP12.03□□□□□ -0.48
COL1A1-204ENST00000474644 NOTCH1P46531 2555 aa12.02□□□□□ -0.48
COL1A1-204ENST00000474644 IGHV3-35A0A0C4DH35 117 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 PRSS46E5RG02 174 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 TSC22D2O75157 780 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 RND2P52198 227 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 TAS2R30P59541 319 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 RAB32Q13637 225 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 ETFRF1Q6IPR1 90 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 REC114Q7Z4M0 266 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 ZNF414Q96IQ9 312 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 NMES1Q9C002 83 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 ZNF436Q9C0F3 470 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-204ENST00000474644 C11orf1Q9H5F2 150 aa12.02□□□□□ -0.49
COL1A1-204ENST00000474644 L7N2F9 121 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 LGALS9O00182 355 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 NUPL2O15504 423 aaKnown RBP12.01□□□□□ -0.49
COL1A1-204ENST00000474644 SAP30O75446 220 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 CLN5O75503 358 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 VAMP2P63027 116 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 FAM106AQ4KMX7 169 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 C9orf66Q5T8R8 295 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 UNQ9165/PRO28630Q6UXU0 137 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 IL34Q6ZMJ4 242 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 TMEM116Q8NCL8 245 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 WDR89Q96FK6 387 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-204ENST00000474644 GPR61Q9BZJ8 451 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 NOTCH3Q9UM47 2321 aa12.01□□□□□ -0.49
COL1A1-204ENST00000474644 A8MWP6 167 aa12□□□□□ -0.49
COL1A1-204ENST00000474644 NDUFA4O00483 81 aa12□□□□□ -0.49
COL1A1-204ENST00000474644 CXCL3P19876 107 aa12□□□□□ -0.49
COL1A1-204ENST00000474644 GPX4P36969 197 aaPredicted RBP12□□□□□ -0.49
COL1A1-204ENST00000474644 CYCSP99999 105 aaKnown RBP12□□□□□ -0.49
COL1A1-204ENST00000474644 RELQ04864 619 aaPredicted RBP12□□□□□ -0.49
COL1A1-204ENST00000474644 TMEM14EPQ6UXP3 125 aa12□□□□□ -0.49
COL1A1-204ENST00000474644 TMEM190Q8WZ59 177 aa12□□□□□ -0.49
COL1A1-204ENST00000474644 ACY3Q96HD9 319 aa12□□□□□ -0.49
COL1A1-204ENST00000474644 ELOVL1Q9BW60 279 aa12□□□□□ -0.49
COL1A1-204ENST00000474644 MED28Q9H204 178 aa12□□□□□ -0.49
COL1A1-204ENST00000474644 PEMTQ9UBM1 199 aa12□□□□□ -0.49
COL1A1-204ENST00000474644 ZNF320A2RRD8 509 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 PMS2P5A8MQ11 134 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 CCNKO75909 580 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 METTL15P1P0C7V9 234 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 IGLC1P0CG04 106 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 PVALBP20472 110 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-204ENST00000474644 GAMTQ14353 236 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 FCN2Q15485 313 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 BEAN1Q3B7T3 259 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 KPRPQ5T749 579 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-204ENST00000474644 OR8G2PQ6IF36 304 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 CACNG8Q8WXS5 425 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 NPIPB3Q92617 1050 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 SLC35E1Q96K37 410 aa11.99□□□□□ -0.49
COL1A1-204ENST00000474644 TMEM213A2RRL7 107 aa11.98□□□□□ -0.49
COL1A1-204ENST00000474644 SCGB2A1O75556 95 aa11.98□□□□□ -0.49
COL1A1-204ENST00000474644 DEDDO75618 318 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms