RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 TM2D3Q9BRN9 247 aa13.46□□□□□ -0.25
EFNA1-204ENST00000474413 C20orf24Q9BUV8 137 aa13.46□□□□□ -0.25
EFNA1-204ENST00000474413 PALMDQ9NP74 551 aa13.46□□□□□ -0.25
EFNA1-204ENST00000474413 U3KQK5 164 aa13.46□□□□□ -0.25
EFNA1-204ENST00000474413 NBEAL2Q6ZNJ1 2754 aa13.45□□□□□ -0.26
EFNA1-204ENST00000474413 A0A1B0GU03 582 aa13.45□□□□□ -0.26
EFNA1-204ENST00000474413 C15orf62A8K5M9 175 aa13.45□□□□□ -0.26
EFNA1-204ENST00000474413 NUPL2O15504 423 aaKnown RBP13.45□□□□□ -0.26
EFNA1-204ENST00000474413 SRPXP78539 464 aa13.45□□□□□ -0.26
EFNA1-204ENST00000474413 GUCA2BQ16661 112 aa13.45□□□□□ -0.26
EFNA1-204ENST00000474413 C2orf83Q53S99 150 aa13.45□□□□□ -0.26
EFNA1-204ENST00000474413 CENPSQ8N2Z9 138 aa13.45□□□□□ -0.26
EFNA1-204ENST00000474413 DEFB125Q8N687 156 aa13.45□□□□□ -0.26
EFNA1-204ENST00000474413 SLC24A4Q8NFF2 622 aa13.45□□□□□ -0.26
EFNA1-204ENST00000474413 A6NHS1 94 aa13.44□□□□□ -0.26
EFNA1-204ENST00000474413 K7EMT4 169 aa13.44□□□□□ -0.26
EFNA1-204ENST00000474413 GNG7O60262 68 aa13.44□□□□□ -0.26
EFNA1-204ENST00000474413 IGKV1-17P01599 117 aa13.44□□□□□ -0.26
EFNA1-204ENST00000474413 ANXA3P12429 323 aa13.44□□□□□ -0.26
EFNA1-204ENST00000474413 HTR2BP41595 481 aa13.44□□□□□ -0.26
EFNA1-204ENST00000474413 TOMM20LQ6UXN7 152 aa13.44□□□□□ -0.26
EFNA1-204ENST00000474413 RBKSQ9H477 322 aa13.44□□□□□ -0.26
EFNA1-204ENST00000474413 ENY2Q9NPA8 101 aa13.44□□□□□ -0.26
EFNA1-204ENST00000474413 HEYLQ9NQ87 328 aaPredicted RBP13.44□□□□□ -0.26
EFNA1-204ENST00000474413 GAR1Q9NY12 217 aaKnown RBP13.44□□□□□ -0.26
EFNA1-204ENST00000474413 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 DUXBA0A1W2PPF3 345 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 RBMY1BA6NDE4 496 aaKnown RBP13.43□□□□□ -0.26
EFNA1-204ENST00000474413 RBMY1EA6NEQ0 496 aaKnown RBP13.43□□□□□ -0.26
EFNA1-204ENST00000474413 CEBPZOSA8MTT3 80 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 CORTO00230 105 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 TMEM50AO95807 157 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 RBMY1DP0C7P1 496 aaKnown RBP13.43□□□□□ -0.26
EFNA1-204ENST00000474413 OPRK1P41145 380 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 RELQ04864 619 aaPredicted RBP13.43□□□□□ -0.26
EFNA1-204ENST00000474413 CNPY1Q3B7I2 92 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 OR4X1Q8NH49 305 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 CITED4Q96RK1 184 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 SMPXQ9UHP9 88 aa13.43□□□□□ -0.26
EFNA1-204ENST00000474413 IGHV7-4-1A0A0J9YVY3 117 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 C9orf170A2RU37 121 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 NAP1L6A6NFF2 107 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 CLN5O75503 358 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 APOHP02749 345 aaPredicted RBP13.42□□□□□ -0.26
EFNA1-204ENST00000474413 NPY1RP25929 384 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 NPBWR1P48145 328 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 SUB1P53999 127 aaKnown RBP eCLIP13.42□□□□□ -0.26
EFNA1-204ENST00000474413 HAGHQ16775 308 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 PRSS54Q6PEW0 395 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 DUSP18Q8NEJ0 188 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 DTD1Q8TEA8 209 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 RCHY1Q96PM5 261 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 RNF2Q99496 336 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 PUS1Q9Y606 427 aaKnown RBP eCLIP13.42□□□□□ -0.26
EFNA1-204ENST00000474413 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
EFNA1-204ENST00000474413 DYNC2H1Q8NCM8 4307 aaKnown RBP13.42□□□□□ -0.26
EFNA1-204ENST00000474413 RYR3Q15413 4870 aa13.41□□□□□ -0.26
EFNA1-204ENST00000474413 TRAV25A0A0B4J276 109 aa13.41□□□□□ -0.26
EFNA1-204ENST00000474413 MPTX1A8MV57 137 aa13.41□□□□□ -0.26
EFNA1-204ENST00000474413 CHEK1O14757 476 aa13.41□□□□□ -0.26
EFNA1-204ENST00000474413 TSPAN4O14817 238 aa13.41□□□□□ -0.26
EFNA1-204ENST00000474413 IGLC1P0CG04 106 aa13.41□□□□□ -0.26
EFNA1-204ENST00000474413 ANXA7P20073 488 aaKnown RBP13.41□□□□□ -0.26
EFNA1-204ENST00000474413 UBE2MP61081 183 aaKnown RBP13.41□□□□□ -0.26
EFNA1-204ENST00000474413 ODF3L2Q3SX64 289 aa13.41□□□□□ -0.26
EFNA1-204ENST00000474413 LILRB2Q8N423 598 aa13.41□□□□□ -0.26
EFNA1-204ENST00000474413 RNASEH2CQ8TDP1 164 aaKnown RBP13.41□□□□□ -0.26
EFNA1-204ENST00000474413 CSMD3Q7Z407 3707 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 IGHV3OR16-13A0A075B7E8 117 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 IGHV3-74A0A0B4J1X5 117 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 OR11H12B2RN74 326 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 ADAP1O75689 374 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 YIF1AO95070 293 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 SLC25A6P12236 298 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 INPP1P49441 399 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 RND2P52198 227 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 DHRS2Q13268 280 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 TIGITQ495A1 244 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 GGNBP1Q5YKI7 109 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 FAM90A2PQ658T7 463 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 ZNF600Q6ZNG1 722 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 OR1S1Q8NH92 325 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 WWC2-AS2Q96NR7 200 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 C7orf50Q9BRJ6 194 aaKnown RBP13.4□□□□□ -0.26
EFNA1-204ENST00000474413 RHPN1-AS1Q9BWJ2 59 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 SRD5A3Q9H8P0 318 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 RETNQ9HD89 108 aa13.4□□□□□ -0.26
EFNA1-204ENST00000474413 HOXB5P09067 269 aa13.39□□□□□ -0.27
EFNA1-204ENST00000474413 TMEM116Q8NCL8 245 aa13.39□□□□□ -0.27
EFNA1-204ENST00000474413 OR52B4Q8NGK2 314 aa13.39□□□□□ -0.27
EFNA1-204ENST00000474413 ST8SIA2Q92186 375 aa13.39□□□□□ -0.27
EFNA1-204ENST00000474413 SPAG8Q99932 426 aaPredicted RBP13.39□□□□□ -0.27
EFNA1-204ENST00000474413 LYRM1O43325 122 aa13.38□□□□□ -0.27
EFNA1-204ENST00000474413 OR4E1P0C645 316 aa13.38□□□□□ -0.27
EFNA1-204ENST00000474413 LYG2Q86SG7 212 aa13.38□□□□□ -0.27
EFNA1-204ENST00000474413 VSIRQ9H7M9 311 aa13.38□□□□□ -0.27
EFNA1-204ENST00000474413 TMED3Q9Y3Q3 217 aa13.38□□□□□ -0.27
EFNA1-204ENST00000474413 IAPPP10997 89 aa13.37□□□□□ -0.27
EFNA1-204ENST00000474413 RBPMS2Q6ZRY4 209 aaKnown RBP13.37□□□□□ -0.27
EFNA1-204ENST00000474413 SLC16A13Q7RTY0 426 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms