RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 CD81P60033 236 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 SUPT4H1P63272 117 aaKnown RBP9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 GUCA2BQ16661 112 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 BSXQ3C1V8 233 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 TMEM128Q5BJH2 165 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 TMEM61Q8N0U2 210 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 LGI3Q8N145 548 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 DUSP18Q8NEJ0 188 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 PINX1Q96BK5 328 aaKnown RBP9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 GPR146Q96CH1 333 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 NEURL2Q9BR09 285 aa9.75□□□□□ -0.85
SHROOM3-204ENST00000473602 DUXBA0A1W2PPF3 345 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 NAP1L6A6NFF2 107 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 HTR2BP41595 481 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 INPP1P49441 399 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 CCR6P51684 374 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 RBMS2Q15434 407 aaKnown RBP9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 ANKRD55Q3KP44 614 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 BTNL8Q6UX41 500 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 SLC16A13Q7RTY0 426 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 TMED4Q7Z7H5 227 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 WDR89Q96FK6 387 aaPredicted RBP9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 TM2D3Q9BRN9 247 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 TUBA4BQ9H853 241 aa9.74□□□□□ -0.85
SHROOM3-204ENST00000473602 SCGB2A1O75556 95 aa9.73□□□□□ -0.85
SHROOM3-204ENST00000473602 NMSQ5H8A3 153 aa9.73□□□□□ -0.85
SHROOM3-204ENST00000473602 TRIQKQ629K1 86 aa9.73□□□□□ -0.85
SHROOM3-204ENST00000473602 RBPMS2Q6ZRY4 209 aaKnown RBP9.73□□□□□ -0.85
SHROOM3-204ENST00000473602 OR10C1Q96KK4 312 aa9.73□□□□□ -0.85
SHROOM3-204ENST00000473602 C20orf24Q9BUV8 137 aa9.73□□□□□ -0.85
SHROOM3-204ENST00000473602 HEYLQ9NQ87 328 aaPredicted RBP9.73□□□□□ -0.85
SHROOM3-204ENST00000473602 RPS10-NUDT3A0A1W2PQS6 291 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 CEBPZOSA8MTT3 80 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 CD7P09564 240 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 OPRK1P41145 380 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 UBE2MP61081 183 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 SMCO1Q147U7 214 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 C2orf83Q53S99 150 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 LAMTOR1Q6IAA8 161 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 NOXA1Q86UR1 476 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 CENPSQ8N2Z9 138 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 LRTM2Q8N967 370 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 SLC24A4Q8NFF2 622 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 RNASEH2CQ8TDP1 164 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 SPAG8Q99932 426 aaPredicted RBP9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 GINS3Q9BRX5 216 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 HIPK2Q9H2X6 1198 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 PRR13Q9NZ81 148 aa9.72□□□□□ -0.85
SHROOM3-204ENST00000473602 A0A1B0GU03 582 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 OR11H12B2RN74 326 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 TSPAN4O14817 238 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 SCAF4O95104 1147 aaKnown RBP9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 IGHV3-48P01763 117 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 VAMP1P23763 118 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 BMI1P35226 326 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 TNFRSF9Q07011 255 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 BAK1Q16611 211 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 ZNF600Q6ZNG1 722 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 LYZL2Q7Z4W2 148 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 OR52B4Q8NGK2 314 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 OR4X1Q8NH49 305 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 ZNF414Q96IQ9 312 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 C7orf50Q9BRJ6 194 aaKnown RBP9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 FNDC4Q9H6D8 234 aaPredicted RBP9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 HSPB7Q9UBY9 170 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 SMPXQ9UHP9 88 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 ALMS1Q8TCU4 4167 aa9.71□□□□□ -0.86
SHROOM3-204ENST00000473602 TRAV30A0A087WSZ9 112 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 IGHV7-4-1A0A0J9YVY3 117 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 CENPXA8MT69 81 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 CLN5O75503 358 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 YIF1AO95070 293 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 SFT2D2O95562 160 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 TMEM50AO95807 157 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 SLC25A4P12235 298 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 SLC25A6P12236 298 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 NPY1RP25929 384 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 ATP5IP56385 69 aaPredicted RBP9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 LINC00322Q6ZN03 302 aaPredicted RBP9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 SDHCQ99643 169 aaPredicted RBP9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 SPATA25Q9BR10 227 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 TMED3Q9Y3Q3 217 aa9.7□□□□□ -0.86
SHROOM3-204ENST00000473602 IGHV3OR16-8A0A075B7F1 116 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 TRAV14DV4A0A0A6YYC5 116 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 ZNF207O43670 478 aaKnown RBP9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 JTBO76095 146 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 NDUFB6O95139 128 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 CD5P06127 495 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 IL7P13232 177 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 PPP1R1AQ13522 171 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 HAGHQ16775 308 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 ETFRF1Q6IPR1 90 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 TOMM20LQ6UXN7 152 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 LINC00299Q6ZSB3 139 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 TMEM116Q8NCL8 245 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 OR1S1Q8NH92 325 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 DTD1Q8TEA8 209 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 FAM110AQ9BQ89 295 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 SRD5A3Q9H8P0 318 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 SELENOKQ9Y6D0 94 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms