RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 PRR13Q9NZ81 148 aa16.85■□□□□ 0.29
PTP4A1-203ENST00000473334 IGHV7-4-1A0A0J9YVY3 117 aa16.84■□□□□ 0.29
PTP4A1-203ENST00000473334 OPRK1P41145 380 aa16.84■□□□□ 0.29
PTP4A1-203ENST00000473334 HTR2BP41595 481 aa16.84■□□□□ 0.29
PTP4A1-203ENST00000473334 SUPT4H1P63272 117 aaKnown RBP16.84■□□□□ 0.29
PTP4A1-203ENST00000473334 TMEM50AO95807 157 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 SULT1A3P0DMM9 295 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 SULT1A4P0DMN0 295 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 ANXA3P12429 323 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 ZNF600Q6ZNG1 722 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 NBEAL2Q6ZNJ1 2754 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 TMEM116Q8NCL8 245 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 DEDD2Q8WXF8 326 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 GINS3Q9BRX5 216 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 RHPN1-AS1Q9BWJ2 59 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 FNDC4Q9H6D8 234 aaPredicted RBP16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 EDA2RQ9HAV5 297 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 RETNQ9HD89 108 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 HEYLQ9NQ87 328 aaPredicted RBP16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 CACFD1Q9UGQ2 172 aa16.83■□□□□ 0.28
PTP4A1-203ENST00000473334 TRAV14DV4A0A0A6YYC5 116 aa16.82■□□□□ 0.28
PTP4A1-203ENST00000473334 A0A0B4J2A0 478 aa16.82■□□□□ 0.28
PTP4A1-203ENST00000473334 CEBPZOSA8MTT3 80 aa16.82■□□□□ 0.28
PTP4A1-203ENST00000473334 CHEK1O14757 476 aa16.82■□□□□ 0.28
PTP4A1-203ENST00000473334 SRPXP78539 464 aa16.82■□□□□ 0.28
PTP4A1-203ENST00000473334 TOMM20LQ6UXN7 152 aa16.82■□□□□ 0.28
PTP4A1-203ENST00000473334 SHPKQ9UHJ6 478 aa16.82■□□□□ 0.28
PTP4A1-203ENST00000473334 OR4C46A6NHA9 309 aa16.81■□□□□ 0.28
PTP4A1-203ENST00000473334 NMSQ5H8A3 153 aa16.81■□□□□ 0.28
PTP4A1-203ENST00000473334 SPANXN2Q5MJ10 180 aa16.81■□□□□ 0.28
PTP4A1-203ENST00000473334 LGI3Q8N145 548 aa16.81■□□□□ 0.28
PTP4A1-203ENST00000473334 OR4X1Q8NH49 305 aa16.81■□□□□ 0.28
PTP4A1-203ENST00000473334 RNF2Q99496 336 aa16.81■□□□□ 0.28
PTP4A1-203ENST00000473334 GGTLC1Q9BX51 225 aa16.81■□□□□ 0.28
PTP4A1-203ENST00000473334 MRPL36Q9P0J6 103 aaKnown RBP16.81■□□□□ 0.28
PTP4A1-203ENST00000473334 LOC102724200A0A096LPH7 203 aaPredicted RBP16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 IGHV3-49A0A0A0MS15 119 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 RPS10-NUDT3A0A1W2PQS6 291 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 CLN5O75503 358 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 NXPH3O95157 252 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 CCR6P51684 374 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 C2orf83Q53S99 150 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 CASC10Q5T4H9 136 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 LYZL2Q7Z4W2 148 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 TMED4Q7Z7H5 227 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 SLC24A4Q8NFF2 622 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 ZFAND3Q9H8U3 227 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 UBQLN2Q9UHD9 624 aa16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 PUS1Q9Y606 427 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTP4A1-203ENST00000473334 PIGBOS1A0A0B4J2F0 54 aa16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 SCGB2A1O75556 95 aa16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 LYL1P12980 280 aa16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 BMI1P35226 326 aa16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 SMCO1Q147U7 214 aa16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 MLANAQ16655 118 aa16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 TMEM128Q5BJH2 165 aa16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 RNASEH2CQ8TDP1 164 aaKnown RBP16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 FAM110AQ9BQ89 295 aa16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 SLC25A21Q9BQT8 299 aaPredicted RBP16.79■□□□□ 0.28
PTP4A1-203ENST00000473334 TNFRSF9Q07011 255 aa16.78■□□□□ 0.28
PTP4A1-203ENST00000473334 ODF3L2Q3SX64 289 aa16.78■□□□□ 0.28
PTP4A1-203ENST00000473334 SRRQ9GZT4 340 aa16.78■□□□□ 0.28
PTP4A1-203ENST00000473334 IGHV3OR16-13A0A075B7E8 117 aa16.77■□□□□ 0.28
PTP4A1-203ENST00000473334 IGHV3-74A0A0B4J1X5 117 aa16.77■□□□□ 0.28
PTP4A1-203ENST00000473334 A0A1B0GU03 582 aa16.77■□□□□ 0.28
PTP4A1-203ENST00000473334 NPY1RP25929 384 aa16.77■□□□□ 0.28
PTP4A1-203ENST00000473334 HSPB7Q9UBY9 170 aa16.77■□□□□ 0.28
PTP4A1-203ENST00000473334 TRAV30A0A087WSZ9 112 aa16.76■□□□□ 0.27
PTP4A1-203ENST00000473334 DUXBA0A1W2PPF3 345 aa16.76■□□□□ 0.27
PTP4A1-203ENST00000473334 SLC25A4P12235 298 aa16.76■□□□□ 0.27
PTP4A1-203ENST00000473334 FAM90A2PQ658T7 463 aa16.76■□□□□ 0.27
PTP4A1-203ENST00000473334 NOXA1Q86UR1 476 aa16.76■□□□□ 0.27
PTP4A1-203ENST00000473334 TMEM170AQ8WVE7 144 aa16.76■□□□□ 0.27
PTP4A1-203ENST00000473334 ST8SIA2Q92186 375 aa16.76■□□□□ 0.27
PTP4A1-203ENST00000473334 VSIRQ9H7M9 311 aa16.76■□□□□ 0.27
PTP4A1-203ENST00000473334 CD5P06127 495 aa16.75■□□□□ 0.27
PTP4A1-203ENST00000473334 VAMP1P23763 118 aa16.75■□□□□ 0.27
PTP4A1-203ENST00000473334 TCF24Q7RTU0 167 aa16.75■□□□□ 0.27
PTP4A1-203ENST00000473334 DTD1Q8TEA8 209 aa16.75■□□□□ 0.27
PTP4A1-203ENST00000473334 IGKV3-7A0A075B6H7 116 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 IGKV1-17P01599 117 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 APOHP02749 345 aaPredicted RBP16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 INPP1P49441 399 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 RND2P52198 227 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 RBMS2Q15434 407 aaKnown RBP16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 TIGITQ495A1 244 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 ETFRF1Q6IPR1 90 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 PRSS54Q6PEW0 395 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 LRTM2Q8N967 370 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 OR1S1Q8NH92 325 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 RBKSQ9H477 322 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 TMEM231Q9H6L2 316 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 U3KQ87 197 aa16.74■□□□□ 0.27
PTP4A1-203ENST00000473334 RYR3Q15413 4870 aa16.73■□□□□ 0.27
PTP4A1-203ENST00000473334 IFNA10P01566 189 aa16.73■□□□□ 0.27
PTP4A1-203ENST00000473334 NPPCP23582 126 aa16.73■□□□□ 0.27
PTP4A1-203ENST00000473334 TFPI2P48307 235 aa16.73■□□□□ 0.27
PTP4A1-203ENST00000473334 APOC4P55056 127 aa16.73■□□□□ 0.27
PTP4A1-203ENST00000473334 PAFAH1B2P68402 229 aa16.73■□□□□ 0.27
PTP4A1-203ENST00000473334 TRIQKQ629K1 86 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms