RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SEC14L6B5MCN3 397 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 E5RGE8 158 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 OVOL1O14753 267 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 NXPH3O95157 252 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 SIX6O95475 246 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 SCGB1D2O95969 90 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 MBPP02686 304 aaPredicted RBP10.01□□□□□ -0.81
TPM3-216ENST00000473036 HOXA1P49639 335 aaPredicted RBP10.01□□□□□ -0.81
TPM3-216ENST00000473036 PVRIGQ6DKI7 326 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 SLC25A24Q6NUK1 477 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 CLEC19AQ6UXS0 136 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 TCTE3Q8IZS6 198 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 OR2T35Q8NGX2 323 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 ZNF502Q8TBZ5 544 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 DTD1Q8TEA8 209 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 TMEM170AQ8WVE7 144 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 SMIM8Q96KF7 97 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 WWC2-AS2Q96NR7 200 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 ZC4H2Q9NQZ6 224 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 SORL1Q92673 2214 aa10.01□□□□□ -0.81
TPM3-216ENST00000473036 MPTX1A8MV57 137 aa10□□□□□ -0.81
TPM3-216ENST00000473036 I3L2K1 104 aa10□□□□□ -0.81
TPM3-216ENST00000473036 CORTO00230 105 aa10□□□□□ -0.81
TPM3-216ENST00000473036 TSC22D2O75157 780 aa10□□□□□ -0.81
TPM3-216ENST00000473036 MPC2O95563 127 aa10□□□□□ -0.81
TPM3-216ENST00000473036 RNASE2P10153 161 aaKnown RBP10□□□□□ -0.81
TPM3-216ENST00000473036 HIST1H1BP16401 226 aaKnown RBP10□□□□□ -0.81
TPM3-216ENST00000473036 SYNJ2BPP57105 145 aa10□□□□□ -0.81
TPM3-216ENST00000473036 S100A10P60903 97 aa10□□□□□ -0.81
TPM3-216ENST00000473036 RAB11AP62491 216 aa10□□□□□ -0.81
TPM3-216ENST00000473036 BSXQ3C1V8 233 aa10□□□□□ -0.81
TPM3-216ENST00000473036 ACSM6Q6P461 480 aa10□□□□□ -0.81
TPM3-216ENST00000473036 PRSS54Q6PEW0 395 aa10□□□□□ -0.81
TPM3-216ENST00000473036 ADAMTSL5Q6ZMM2 481 aa10□□□□□ -0.81
TPM3-216ENST00000473036 HAPLN4Q86UW8 402 aa10□□□□□ -0.81
TPM3-216ENST00000473036 OR1P1Q8NH06 330 aa10□□□□□ -0.81
TPM3-216ENST00000473036 SCARB1Q8WTV0 552 aa10□□□□□ -0.81
TPM3-216ENST00000473036 PPP1R14BQ96C90 147 aa10□□□□□ -0.81
TPM3-216ENST00000473036 SLC25A31Q9H0C2 315 aa10□□□□□ -0.81
TPM3-216ENST00000473036 THYN1Q9P016 225 aa10□□□□□ -0.81
TPM3-216ENST00000473036 A0A1B0GVG6 124 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 WI2-2373I1.2A0A1W2PRP0 233 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 K7EPK0 472 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 DEDDO75618 318 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 OR2C1O95371 312 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 IGHV3-48P01763 117 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 CLEC3BP05452 202 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 SLC25A4P12235 298 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 RAB32Q13637 225 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 MLANAQ16655 118 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 INO80EQ8NBZ0 244 aaPredicted RBP9.99□□□□□ -0.81
TPM3-216ENST00000473036 RBKSQ9H477 322 aa9.99□□□□□ -0.81
TPM3-216ENST00000473036 MRPL36Q9P0J6 103 aaKnown RBP9.99□□□□□ -0.81
TPM3-216ENST00000473036 STRAPQ9Y3F4 350 aaKnown RBP9.99□□□□□ -0.81
TPM3-216ENST00000473036 IFNA10P01566 189 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 ZP3P21754 424 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 GPR183P32249 361 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 ADMP35318 185 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 P2RY1P47900 373 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 POLR2GP62487 172 aaKnown RBP eCLIP9.98□□□□□ -0.81
TPM3-216ENST00000473036 C9orf66Q5T8R8 295 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 VN1R17PQ8TDU5 208 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 EEF1AKMT3Q96AZ1 226 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 HYLS1Q96M11 299 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 CHRDL1Q9BU40 450 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 MCRIP2Q9BUT9 160 aaKnown RBP9.98□□□□□ -0.81
TPM3-216ENST00000473036 GPR61Q9BZJ8 451 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 PSENENQ9NZ42 101 aa9.98□□□□□ -0.81
TPM3-216ENST00000473036 LSM5Q9Y4Y9 91 aaKnown RBP9.98□□□□□ -0.81
TPM3-216ENST00000473036 TRBV7-1A0A0A6YYK4 115 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 K7EIL1 84 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 SSSCA1O60232 199 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 MT-CO2P00403 227 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 CSN3P07498 182 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 LYL1P12980 280 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 C4BPBP20851 252 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 BAXQ07812 192 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 RPEL1Q2QD12 228 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 LRRC37A5PQ49AS3 106 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 FAM209BQ5JX69 171 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 ETFRF1Q6IPR1 90 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 UNQ9165/PRO28630Q6UXU0 137 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 ZNF546Q86UE3 836 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 STX12Q86Y82 276 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 OR9G4Q8NGQ1 327 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 RNASEH2CQ8TDP1 164 aaKnown RBP9.97□□□□□ -0.81
TPM3-216ENST00000473036 MISP3Q96FF7 219 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 ST6GAL2Q96JF0 529 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 CXorf58Q96LI9 332 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 MAGT1Q9H0U3 335 aa9.97□□□□□ -0.81
TPM3-216ENST00000473036 FNDC4Q9H6D8 234 aaPredicted RBP9.97□□□□□ -0.81
TPM3-216ENST00000473036 IGHV3-35A0A0C4DH35 117 aa9.96□□□□□ -0.82
TPM3-216ENST00000473036 OR2T8A6NH00 312 aa9.96□□□□□ -0.82
TPM3-216ENST00000473036 HMSDA8MTL9 139 aa9.96□□□□□ -0.82
TPM3-216ENST00000473036 GGCTO75223 188 aaKnown RBP9.96□□□□□ -0.82
TPM3-216ENST00000473036 SAP30O75446 220 aa9.96□□□□□ -0.82
TPM3-216ENST00000473036 C1QBP02746 253 aa9.96□□□□□ -0.82
TPM3-216ENST00000473036 ARL3P36405 182 aa9.96□□□□□ -0.82
TPM3-216ENST00000473036 HBG1P69891 147 aa9.96□□□□□ -0.82
TPM3-216ENST00000473036 HBG2P69892 147 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms