RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 EDDM3AQ14507 147 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 TEX36Q5VZQ5 186 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 TRAPPC6BQ86SZ2 158 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 PHF13Q86YI8 300 aaPredicted RBP1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 TRIM4Q9C037 500 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 DCSTAMPQ9H295 470 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 OR51V1Q9H2C8 321 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 MIXL1Q9H2W2 232 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 MED13Q9UHV7 2174 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 MYO3BQ8WXR4 1341 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 HECW2Q9P2P5 1572 aa1.34□□□□□ -2.19
PRPF40A-208ENST00000472760 A0A087WUJ7 227 aa1.34□□□□□ -2.19
PRPF40A-208ENST00000472760 SMIM9A6NGZ8 99 aa1.34□□□□□ -2.19
PRPF40A-208ENST00000472760 OR6V1Q8N148 313 aa1.34□□□□□ -2.19
PRPF40A-208ENST00000472760 GDPD1Q8N9F7 314 aa1.34□□□□□ -2.19
PRPF40A-208ENST00000472760 CT55Q8WUE5 264 aa1.34□□□□□ -2.19
PRPF40A-208ENST00000472760 OSTCQ9NRP0 149 aa1.34□□□□□ -2.19
PRPF40A-208ENST00000472760 ROBO3Q96MS0 1386 aa1.34□□□□□ -2.2
PRPF40A-208ENST00000472760 BRWD1Q9NSI6 2320 aa1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 TRAV1-1A0A0B4J248 108 aa1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 hADV38S2A0JD32 116 aa1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 GEMIN2O14893 280 aaKnown RBP1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 OR2B3O76000 313 aa1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 OR2J2O76002 312 aa1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 SRSF6Q13247 344 aaKnown RBP1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 IAH1Q2TAA2 248 aaPredicted RBP1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 OOSP2Q86WS3 158 aa1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 LINC00311Q8N616 119 aa1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 ODF3Q96PU9 254 aa1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 STRCQ7RTU9 1775 aa1.33□□□□□ -2.2
PRPF40A-208ENST00000472760 KIF13BQ9NQT8 1826 aa1.32□□□□□ -2.2
PRPF40A-208ENST00000472760 TMEM114B3SHH9 223 aa1.32□□□□□ -2.2
PRPF40A-208ENST00000472760 YPEL3P61236 119 aaPredicted RBP1.32□□□□□ -2.2
PRPF40A-208ENST00000472760 C14orf105Q9NVL8 296 aa1.32□□□□□ -2.2
PRPF40A-208ENST00000472760 TAS2R4Q9NYW5 299 aa1.32□□□□□ -2.2
PRPF40A-208ENST00000472760 GLTPQ9NZD2 209 aa1.32□□□□□ -2.2
PRPF40A-208ENST00000472760 PRELID3BQ9Y3B1 194 aa1.32□□□□□ -2.2
PRPF40A-208ENST00000472760 BAZ2BQ9UIF8 2168 aaKnown RBP1.32□□□□□ -2.2
PRPF40A-208ENST00000472760 NEO1Q92859 1461 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 FBN3Q75N90 2809 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 HECW1Q76N89 1606 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 hCG_1818297A0A087WSY0 165 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 C2orf70A6NJV1 201 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 A8MT66 165 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 OR1I1O60431 355 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 BAALC-AS2P0C853 105 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 CASP1P29466 404 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 C12orf74Q32Q52 190 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 LINC01554Q52M75 96 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 TMEM97Q5BJF2 176 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 OR52R1Q8NGF1 315 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 GPR146Q96CH1 333 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 CYSLTR1Q9Y271 337 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 FREM1Q5H8C1 2179 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 NCOA1Q15788 1441 aa1.31□□□□□ -2.2
PRPF40A-208ENST00000472760 FLG2Q5D862 2391 aaPredicted RBP1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 A0A087WX48 190 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 OR2T1O43869 369 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 PDE6DO43924 150 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 UBL3O95164 117 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 ZNF682O95780 498 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 MGST1P10620 155 aaKnown RBP1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 MIFP14174 115 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 SSR2P43308 183 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 HIST1H3AP68431 136 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 H3F3AP84243 136 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 SPA17Q15506 151 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 RNASE10Q5GAN6 216 aaKnown RBP1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 UCK1Q9HA47 277 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 SLC22A13Q9Y226 551 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 PIK3C2GO75747 1445 aa1.3□□□□□ -2.2
PRPF40A-208ENST00000472760 SERPINE1P05121 402 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 SMIM17P0DL12 118 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 PPIBP23284 216 aaKnown RBP1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 RAB4BP61018 213 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 RHOGP84095 191 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 OR51A2Q8NGJ7 313 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 C2orf50Q96LR7 162 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 MRPL57Q9BQC6 102 aaKnown RBP1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 UQCC1Q9NVA1 299 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 NHP2Q9NX24 153 aaKnown RBP1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 KLK9Q9UKQ9 250 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 SLC35A3Q9Y2D2 325 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 RTL1A6NKG5 1358 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 ZFYVE9O95405 1425 aa1.29□□□□□ -2.2
PRPF40A-208ENST00000472760 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 KMT2BQ9UMN6 2715 aaPredicted RBP1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 A0A087X0T9 212 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 C1orf196B1AJZ1 125 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 C19orf84I3L1E1 186 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 SULT1B1O43704 296 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 HYPMO75409 117 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 E2F6O75461 281 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 PROSCO94903 275 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 C8GP07360 202 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 OR4E1P0C645 316 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 CCL7P80098 99 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 PDE6HQ13956 83 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 OR13D1Q8NGV5 346 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 RNASE7Q9H1E1 156 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms