RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 DEFA5Q01523 94 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 CD69Q07108 199 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 SLC16A13Q7RTY0 426 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 LILRB2Q8N423 598 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 MYOZ3Q8TDC0 251 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 OR5B12Q96R08 314 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 ATP6V0BQ99437 205 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 CITED1Q99966 193 aa13.09□□□□□ -0.31
CCM2-205ENST00000472223 PEF1Q9UBV8 284 aaKnown RBP13.09□□□□□ -0.31
CCM2-205ENST00000472223 TRAV30A0A087WSZ9 112 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 TRAV14DV4A0A0A6YYC5 116 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 SMCO3A2RU48 225 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 ANKRD34BA5PLL1 514 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 K7EIM0 57 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 IGHV3-23P01764 117 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 LYL1P12980 280 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 ATP6V1FQ16864 119 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 ZNF343Q6P1L6 599 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 CLEC19AQ6UXS0 136 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 TCTE3Q8IZS6 198 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 TMEM217Q8N7C4 229 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 OR1S2Q8NGQ3 325 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 TMEM170AQ8WVE7 144 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 ACY3Q96HD9 319 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 GGACTQ9BVM4 153 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 C11orf1Q9H5F2 150 aa13.08□□□□□ -0.32
CCM2-205ENST00000472223 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.07□□□□□ -0.32
CCM2-205ENST00000472223 MFSD2BA6NFX1 497 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 NUPL2O15504 423 aaKnown RBP13.07□□□□□ -0.32
CCM2-205ENST00000472223 PFDN1O60925 122 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 HSPB1P04792 205 aaKnown RBP13.07□□□□□ -0.32
CCM2-205ENST00000472223 CLEC3BP05452 202 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 KRTAP10-3P60369 221 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 DLK1P80370 383 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 EWSR1Q01844 656 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCM2-205ENST00000472223 AKR1C1Q04828 323 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 SLC38A11Q08AI6 406 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 KIAA0141Q14154 515 aaPredicted RBP13.07□□□□□ -0.32
CCM2-205ENST00000472223 SPSB3Q6PJ21 355 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 OR4F17Q8NGA8 305 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 OR4X1Q8NH49 305 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 ZNF502Q8TBZ5 544 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 BSCL2Q96G97 398 aaPredicted RBP13.07□□□□□ -0.32
CCM2-205ENST00000472223 OR4F4Q96R69 305 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 GNB4Q9HAV0 340 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 S4R3C0 116 aa13.07□□□□□ -0.32
CCM2-205ENST00000472223 IGSF23A1L1A6 192 aa13.06□□□□□ -0.32
CCM2-205ENST00000472223 IGHV3-48P01763 117 aa13.06□□□□□ -0.32
CCM2-205ENST00000472223 FABP1P07148 127 aa13.06□□□□□ -0.32
CCM2-205ENST00000472223 ARL3P36405 182 aa13.06□□□□□ -0.32
CCM2-205ENST00000472223 RUNX1Q01196 453 aa13.06□□□□□ -0.32
CCM2-205ENST00000472223 KRTAP21-3Q3LHN1 58 aa13.06□□□□□ -0.32
CCM2-205ENST00000472223 OR1N2Q8NGR9 330 aa13.06□□□□□ -0.32
CCM2-205ENST00000472223 ST6GAL2Q96JF0 529 aa13.06□□□□□ -0.32
CCM2-205ENST00000472223 FNDC4Q9H6D8 234 aaPredicted RBP13.06□□□□□ -0.32
CCM2-205ENST00000472223 NPVFQ9HCQ7 196 aa13.06□□□□□ -0.32
CCM2-205ENST00000472223 FBN1P35555 2871 aaKnown RBP13.06□□□□□ -0.32
CCM2-205ENST00000472223 OR2T8A6NH00 312 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 FNDC10F2Z333 226 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 SMLR1H3BR10 107 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 M0QZ24 198 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 GGCTO75223 188 aaKnown RBP13.05□□□□□ -0.32
CCM2-205ENST00000472223 CLN5O75503 358 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 ZP3P21754 424 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 FCGR2BP31994 310 aaPredicted RBP13.05□□□□□ -0.32
CCM2-205ENST00000472223 GPR183P32249 361 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 RND2P52198 227 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 RAB31Q13636 194 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 MLANAQ16655 118 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 Q5BKY6 102 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 C8orf86Q6ZUL3 223 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 ACOT7LQ6ZUV0 252 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 TMEM116Q8NCL8 245 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 OR11H1Q8NG94 326 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 NPIPB3Q92617 1050 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 MDFIQ99750 246 aa13.05□□□□□ -0.32
CCM2-205ENST00000472223 ZFP92A6NM28 416 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 PMS2P5A8MQ11 134 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 LINC01619G3V211 115 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 I3L521 148 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 ARPC5O15511 151 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 DFFBO76075 338 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 PF4P02776 101 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 AP2S1P53680 142 aaPredicted RBP13.04□□□□□ -0.32
CCM2-205ENST00000472223 NHLH2Q02577 135 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 RELQ04864 619 aaPredicted RBP13.04□□□□□ -0.32
CCM2-205ENST00000472223 ZNF616Q08AN1 781 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 GAMTQ14353 236 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 RPEL1Q2QD12 228 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 OR5C1Q8NGR4 320 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 AQP10Q96PS8 301 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 TMEM147Q9BVK8 224 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 UQCC1Q9NVA1 299 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 HSPB11Q9Y547 144 aa13.04□□□□□ -0.32
CCM2-205ENST00000472223 HMSDA8MTL9 139 aa13.03□□□□□ -0.32
CCM2-205ENST00000472223 CCL24O00175 119 aa13.03□□□□□ -0.32
CCM2-205ENST00000472223 TGOLN2O43493 480 aa13.03□□□□□ -0.32
CCM2-205ENST00000472223 OR10J1P30954 320 aa13.03□□□□□ -0.32
CCM2-205ENST00000472223 ZFP69Q49AA0 526 aa13.03□□□□□ -0.32
CCM2-205ENST00000472223 HYLS1Q96M11 299 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms