RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 VAMP8Q9BV40 100 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 CACNA1DQ01668 2161 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 PLXNA2O75051 1894 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 IGHV1-69DA0A0B4J2H0 117 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 IGHV1-69P01742 117 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 PIP4P2Q8N4L2 257 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 ISOC2Q96AB3 205 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 GFI1Q99684 422 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 GPR61Q9BZJ8 451 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 NIT2Q9NQR4 276 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 LTBP2Q14767 1821 aa10.08□□□□□ -0.8
IRF1-208ENST00000472045 IGHV2-70DA0A0C4DH43 119 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 GRNP28799 593 aaKnown RBP10.07□□□□□ -0.8
IRF1-208ENST00000472045 RNASE4P34096 147 aaKnown RBP10.07□□□□□ -0.8
IRF1-208ENST00000472045 GATA4P43694 442 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 PMS2P11Q13670 270 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 LCNL1Q6ZST4 164 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 MAP1LC3CQ9BXW4 147 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 CRXO43186 299 aaPredicted RBP10.07□□□□□ -0.8
IRF1-208ENST00000472045 C2orf68Q2NKX9 166 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 C2orf83Q53S99 150 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 OR1P1Q8NH06 330 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 MBNL3Q9NUK0 354 aaKnown RBP10.07□□□□□ -0.8
IRF1-208ENST00000472045 H0YJW9 148 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 IGLV1-44P01699 117 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 OR10W1Q8NGF6 305 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 OR8A1Q8NGG7 326 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 C18orf12Q96KH6 178 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 TRAF4Q9BUZ4 470 aaPredicted RBP10.07□□□□□ -0.8
IRF1-208ENST00000472045 NAPSAO96009 420 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 CD8AP01732 235 aa10.07□□□□□ -0.8
IRF1-208ENST00000472045 BTF3P20290 206 aaKnown RBP10.07□□□□□ -0.8
IRF1-208ENST00000472045 PACRGQ96M98 296 aaPredicted RBP10.07□□□□□ -0.8
IRF1-208ENST00000472045 CGAP01215 116 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 NAT1P18440 290 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 LEPP41159 167 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 SCGB1D4Q6XE38 83 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 TMEM191AQ9H0A3 160 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 A0A1W2PNU3 283 aaPredicted RBP10.06□□□□□ -0.8
IRF1-208ENST00000472045 PAX1P15863 534 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 GLMPQ8WWB7 406 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 AP5S1Q9NUS5 200 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 H7C1H1 209 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 DLX1P56177 255 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 ELOBQ15370 118 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 HSPB8Q9UJY1 196 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 HERPUD1Q15011 391 aa10.06□□□□□ -0.8
IRF1-208ENST00000472045 IGKV3OR2-268A0A0C4DH90 116 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 M0R381 172 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 DANCRP0C864 163 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 TCF24Q7RTU0 167 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 USMG5Q96IX5 58 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 SDF2L1Q9HCN8 221 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 FAM208BQ5VWN6 2430 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 TRAV34A0A0B4J273 112 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 SCGB1C2P0DMR2 95 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 DEFB113Q30KQ7 82 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 LEMD1Q68G75 181 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 SPSB3Q6PJ21 355 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 MIR17HGQ75NE6 70 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 RCC1LQ96I51 464 aaKnown RBP10.05□□□□□ -0.8
IRF1-208ENST00000472045 Q6ZR03 302 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
IRF1-208ENST00000472045 CFHR2P36980 270 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 Q9H3A6 140 aa10.05□□□□□ -0.8
IRF1-208ENST00000472045 TRBV6-6A0A0A6YYG2 114 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 FHL1Q13642 323 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 CENPWQ5EE01 88 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 MAP1LC3AQ9H492 121 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 MT-ND6P03923 174 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 CCKARP32238 428 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 IQCJQ1A5X6 159 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 PSMG4Q5JS54 123 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 FAM71F2Q6NXP2 309 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 TNFRSF18Q9Y5U5 241 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 MPTX1A8MV57 137 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 PEX7O00628 323 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 CD5P06127 495 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 SOD3P08294 240 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 SIGLEC15Q6ZMC9 328 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 UTRNP46939 3433 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 KIR2DL4Q99706 377 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 PCNX1Q96RV3 2341 aa10.04□□□□□ -0.8
IRF1-208ENST00000472045 TRBV7-1A0A0A6YYK4 115 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 BEND2Q8NDZ0 799 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 MIEN1Q9BRT3 115 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 SIGLEC9Q9Y336 463 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 ZNF503-AS2A6NEH8 195 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 PHOX2AO14813 284 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 TCF21O43680 179 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 NUDT3O95989 172 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 CD55P08174 381 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 DCAF16Q9NXF7 216 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 FHITP49789 147 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 NEU1Q99519 415 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 SDHCQ99643 169 aaPredicted RBP10.03□□□□□ -0.8
IRF1-208ENST00000472045 OTORQ9NRC9 128 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 IGLV3-9A0A075B6K5 115 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 FBLL1A6NHQ2 334 aaKnown RBP10.03□□□□□ -0.8
IRF1-208ENST00000472045 FAM223BA6NKX1 122 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms