RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 ZNF25P17030 456 aaPredicted RBP0.2□□□□□ -2.38
RBM39-228ENST00000471635 HIST1H1TP22492 207 aaPredicted RBP0.2□□□□□ -2.38
RBM39-228ENST00000471635 RPS20P60866 119 aaKnown RBP0.2□□□□□ -2.38
RBM39-228ENST00000471635 CDC42P60953 191 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 SNRPD2P62316 118 aaKnown RBP0.2□□□□□ -2.38
RBM39-228ENST00000471635 C1orf137Q5JT78 98 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 CDKL4Q5MAI5 379 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 HIST2H3PS2Q5TEC6 136 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 HIST3H2BBQ8N257 126 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 OR52R1Q8NGF1 315 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 TOMM6Q96B49 74 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 PPP1R2P1Q96PQ5 205 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 PRTFDC1Q9NRG1 225 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 ACER3Q9NUN7 267 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 ERGIC3Q9Y282 383 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 PKIGQ9Y2B9 76 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 COL1A1P02452 1464 aaPredicted RBP0.2□□□□□ -2.38
RBM39-228ENST00000471635 E9PCH4 1651 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 WRNQ14191 1432 aaPredicted RBP eCLIP0.2□□□□□ -2.38
RBM39-228ENST00000471635 SCN3AQ9NY46 2000 aa0.2□□□□□ -2.38
RBM39-228ENST00000471635 MTUS2Q5JR59 1369 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 MAP3K5Q99683 1374 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 TRAV3A0A0B4J244 114 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 EXOC1LA0A1B0GW35 172 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 KCNK1O00180 336 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 TCL1BO95988 128 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 CALB1P05937 261 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 CASQ1P31415 396 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 RPL5P46777 297 aaKnown RBP0.19□□□□□ -2.38
RBM39-228ENST00000471635 DEFA1P59665 94 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 OR2F1Q13607 317 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 LPCAT3Q6P1A2 487 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 SOSTDC1Q6X4U4 206 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 C20orf196Q8IYI0 205 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 CDC42SE1Q9NRR8 79 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 SLC39A9Q9NUM3 307 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 NKIRAS1Q9NYS0 192 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 MAST4O15021 2626 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 NUP155O75694 1391 aa0.19□□□□□ -2.38
RBM39-228ENST00000471635 PEAK1Q9H792 1746 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 DOCK5Q9H7D0 1870 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 NAV3Q8IVL0 2385 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 TRAV9-1A0A075B6T8 112 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 ZNF736B4DX44 427 aaPredicted RBP0.18□□□□□ -2.38
RBM39-228ENST00000471635 PSMD12O00232 456 aaPredicted RBP0.18□□□□□ -2.38
RBM39-228ENST00000471635 SULT1B1O43704 296 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 OR2B3O76000 313 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 OR2J2O76002 312 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 IFNA10P01566 189 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 TPM3P06753 285 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 HIST1H1EP10412 219 aaKnown RBP0.18□□□□□ -2.38
RBM39-228ENST00000471635 SPCS3P61009 180 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 HIST3H3Q16695 136 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 SPRNQ5BIV9 151 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 C8orf74Q6P047 294 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 SPATA8Q6RVD6 105 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 ANKRD29Q8N6D5 301 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 C3orf56Q8N813 242 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 OR13D1Q8NGV5 346 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 OR10J5Q8NHC4 309 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 TSPAN32Q96QS1 320 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 OR52E6Q96RD3 313 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 TMEM70Q9BUB7 260 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 COMMD5Q9GZQ3 224 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 RASL12Q9NYN1 266 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 HS3ST2Q9Y278 367 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 TMEM56-RWDD3S4R434 201 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 FRAS1Q86XX4 4008 aa0.18□□□□□ -2.38
RBM39-228ENST00000471635 SNAPC4Q5SXM2 1469 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 ASCC3Q8N3C0 2202 aaKnown RBP0.17□□□□□ -2.38
RBM39-228ENST00000471635 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.17□□□□□ -2.38
RBM39-228ENST00000471635 CCDC160A6NGH7 325 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 CLDN25C9JDP6 229 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 NCR3O14931 201 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 CETN3O15182 167 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 TNNC2P02585 160 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 CD79AP11912 226 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 PSME3P61289 254 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 TPM4P67936 248 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 SRSF6Q13247 344 aaKnown RBP0.17□□□□□ -2.38
RBM39-228ENST00000471635 MPV17LQ2QL34 196 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 ACOT6Q3I5F7 207 aaPredicted RBP0.17□□□□□ -2.38
RBM39-228ENST00000471635 TEX261Q6UWH6 196 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 DOCK3Q8IZD9 2030 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 BORCS5Q969J3 196 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 GPR146Q96CH1 333 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 C10orf95Q9H7T3 257 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 OSTCQ9NRP0 149 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 MRPL27Q9P0M9 148 aaKnown RBP0.17□□□□□ -2.38
RBM39-228ENST00000471635 GUCA1BQ9UMX6 200 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 U3KQ87 197 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 DENND4CQ5VZ89 1909 aa0.17□□□□□ -2.38
RBM39-228ENST00000471635 NEO1Q92859 1461 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 TRAV26-2A0A0B4J265 109 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 CHP2O43745 196 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 PROSCO94903 275 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 IFNA5P01569 189 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 PRH1P02810 166 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 SMIM10L2AP0DMW4 78 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 SMIM10L2BP0DMW5 78 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms