RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 RNF126Q9BV68 326 aa6.64□□□□□ -1.35
CPSF4-211ENST00000471455 VSIRQ9H7M9 311 aa6.64□□□□□ -1.35
CPSF4-211ENST00000471455 RABAC1Q9UI14 185 aa6.64□□□□□ -1.35
CPSF4-211ENST00000471455 IGHV3OR16-13A0A075B7E8 117 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 IGHV3-74A0A0B4J1X5 117 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 IGHV4-28A0A0C4DH34 117 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 CORTO00230 105 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 AMBPP02760 352 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 FCER2P06734 321 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 SNCAP37840 140 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 MXD1Q05195 221 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 DHRS11Q6UWP2 260 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 TOMM20LQ6UXN7 152 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 IZUMO2Q6UXV1 221 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 CROCCP3Q8IVE0 287 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 OR6F1Q8NGZ6 308 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 NRG4Q8WWG1 115 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 ST8SIA2Q92186 375 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 S100A16Q96FQ6 103 aaKnown RBP6.63□□□□□ -1.35
CPSF4-211ENST00000471455 GRAMD2BQ96HH9 432 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 ZNF414Q96IQ9 312 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 METTL26Q96S19 204 aa6.63□□□□□ -1.35
CPSF4-211ENST00000471455 VPS13DQ5THJ4 4388 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 MEIS3P1A6NDR6 274 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 ZNF705EA8MWA4 302 aaPredicted RBP6.62□□□□□ -1.35
CPSF4-211ENST00000471455 ATG12O94817 140 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 NPPCP23582 126 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 NPY1RP25929 384 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 SUB1P53999 127 aaKnown RBP eCLIP6.62□□□□□ -1.35
CPSF4-211ENST00000471455 HSPE1P61604 102 aaKnown RBP6.62□□□□□ -1.35
CPSF4-211ENST00000471455 NUTF2P61970 127 aaKnown RBP6.62□□□□□ -1.35
CPSF4-211ENST00000471455 TMEM69Q5SWH9 247 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 Q6ZTC4 211 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 TRPT1Q86TN4 253 aaKnown RBP6.62□□□□□ -1.35
CPSF4-211ENST00000471455 STXBP6Q8NFX7 210 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 OR5H6Q8NGV6 325 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 PDCD10Q9BUL8 212 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 C1QTNF4Q9BXJ3 329 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 TBC1D24Q9ULP9 559 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 RAB26Q9ULW5 256 aa6.62□□□□□ -1.35
CPSF4-211ENST00000471455 PUS1Q9Y606 427 aaKnown RBP eCLIP6.62□□□□□ -1.35
CPSF4-211ENST00000471455 DEFB131BA0A096LNP1 70 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 LOC100506127A0A0U1RQW1 187 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 HELTA6NFD8 242 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 PRSS29PA6NIE9 313 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 PMP2P02689 132 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 RFX2P48378 723 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 TSPAN5P62079 268 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 PHLDA2Q53GA4 152 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 SOHLH1Q5JUK2 328 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 UBE2NLQ5JXB2 153 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 SPARTQ8N0X7 666 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 POM121L12Q8N7R1 296 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 SLC35G3Q8N808 338 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 NDUFAF3Q9BU61 184 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 FXYD6Q9H0Q3 95 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 Q9H521 79 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 ANAPC10Q9UM13 185 aa6.61□□□□□ -1.35
CPSF4-211ENST00000471455 RYR1P21817 5038 aa6.6□□□□□ -1.35
CPSF4-211ENST00000471455 IGHV3-66A0A0C4DH42 116 aa6.6□□□□□ -1.35
CPSF4-211ENST00000471455 K7EQG2 157 aa6.6□□□□□ -1.35
CPSF4-211ENST00000471455 IGHV3-48P01763 117 aa6.6□□□□□ -1.35
CPSF4-211ENST00000471455 RBMY1A1P0DJD3 496 aaKnown RBP6.6□□□□□ -1.35
CPSF4-211ENST00000471455 RBMY1CP0DJD4 496 aa6.6□□□□□ -1.35
CPSF4-211ENST00000471455 P2RY1P47900 373 aa6.6□□□□□ -1.35
CPSF4-211ENST00000471455 AP2S1P53680 142 aaPredicted RBP6.6□□□□□ -1.35
CPSF4-211ENST00000471455 RBMY1FQ15415 496 aaKnown RBP6.6□□□□□ -1.35
CPSF4-211ENST00000471455 TBC1D26Q86UD7 250 aa6.6□□□□□ -1.35
CPSF4-211ENST00000471455 SEC22AQ96IW7 307 aa6.6□□□□□ -1.35
CPSF4-211ENST00000471455 ENY2Q9NPA8 101 aa6.6□□□□□ -1.35
CPSF4-211ENST00000471455 TRAV30A0A087WSZ9 112 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 TEX48A0A1B0GUV7 120 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 RPS10-NUDT3A0A1W2PQS6 291 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 INS-IGF2F8WCM5 200 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 IFNA17P01571 189 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 APOHP02749 345 aaPredicted RBP6.59□□□□□ -1.35
CPSF4-211ENST00000471455 CLEC2LP0C7M8 214 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 ZNF688P0C7X2 276 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 NAT1P18440 290 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 C4BPBP20851 252 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 PRSS3P35030 304 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 HRH1P35367 487 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 OPRK1P41145 380 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 HOXA1P49639 335 aaPredicted RBP6.59□□□□□ -1.35
CPSF4-211ENST00000471455 AKR1C2P52895 323 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 TAS2R20P59543 309 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 SNRPD3P62318 126 aaKnown RBP6.59□□□□□ -1.35
CPSF4-211ENST00000471455 ACTL10Q5JWF8 245 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 UBE2DNLQ8IWF7 75 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 FAM24BQ8N5W8 94 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 TMEM230Q96A57 120 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 MRGPRFQ96AM1 343 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 FAM210BQ96KR6 192 aa6.59□□□□□ -1.35
CPSF4-211ENST00000471455 YTHDF1Q9BYJ9 559 aaKnown RBP6.59□□□□□ -1.35
CPSF4-211ENST00000471455 A0A1B0GVY2 172 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 TMEM189A5PLL7 270 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 KNCNA6PVL3 124 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 CLN5O75503 358 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 TMEM50AO95807 157 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 IFNA10P01566 189 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms