RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 GBGT1Q8N5D6 347 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 CCDC71LQ8N9Z2 235 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 ST8SIA2Q92186 375 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 TXN2Q99757 166 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 SRRQ9GZT4 340 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 ZFAND3Q9H8U3 227 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 PRR13Q9NZ81 148 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 A0A0J9YWU9 116 aa11.35□□□□□ -0.59
COL1A1-203ENST00000471344 A0A1B0GU03 582 aa11.35□□□□□ -0.59
COL1A1-203ENST00000471344 SNCAP37840 140 aa11.35□□□□□ -0.59
COL1A1-203ENST00000471344 KLF9Q13886 244 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-203ENST00000471344 FAM90A2PQ658T7 463 aa11.35□□□□□ -0.59
COL1A1-203ENST00000471344 RNASE11Q8TAA1 199 aaKnown RBP11.35□□□□□ -0.59
COL1A1-203ENST00000471344 GLYATL2Q8WU03 294 aa11.35□□□□□ -0.59
COL1A1-203ENST00000471344 TMEM222Q9H0R3 208 aa11.35□□□□□ -0.59
COL1A1-203ENST00000471344 NAA60Q9H7X0 242 aa11.35□□□□□ -0.59
COL1A1-203ENST00000471344 NDUFA13Q9P0J0 144 aa11.35□□□□□ -0.59
COL1A1-203ENST00000471344 PUS1Q9Y606 427 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL1A1-203ENST00000471344 TRAV14DV4A0A0A6YYC5 116 aa11.34□□□□□ -0.59
COL1A1-203ENST00000471344 NXPH3O95157 252 aa11.34□□□□□ -0.59
COL1A1-203ENST00000471344 AKAIN1P0CW23 69 aa11.34□□□□□ -0.59
COL1A1-203ENST00000471344 S100A5P33763 92 aa11.34□□□□□ -0.59
COL1A1-203ENST00000471344 SURF2Q15527 256 aaPredicted RBP11.34□□□□□ -0.59
COL1A1-203ENST00000471344 CNPY1Q3B7I2 92 aa11.34□□□□□ -0.59
COL1A1-203ENST00000471344 SELENOHQ8IZQ5 122 aaKnown RBP11.34□□□□□ -0.59
COL1A1-203ENST00000471344 OR51S1Q8NGJ8 323 aa11.34□□□□□ -0.59
COL1A1-203ENST00000471344 RRNAD1Q96FB5 475 aaKnown RBP11.34□□□□□ -0.59
COL1A1-203ENST00000471344 C14orf166Q9Y224 244 aaKnown RBP11.34□□□□□ -0.59
COL1A1-203ENST00000471344 SPRY2O43597 315 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 CDS2O95674 445 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 TMEM50AO95807 157 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 APOC4P55056 127 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 PMS2P11Q13670 270 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 BAK1Q16611 211 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 BSXQ3C1V8 233 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 TCF24Q7RTU0 167 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 DUSP18Q8NEJ0 188 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 IL17DQ8TAD2 202 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 TMEM230Q96A57 120 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 PDCD10Q9BUL8 212 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 MAP6D1Q9H9H5 199 aa11.33□□□□□ -0.6
COL1A1-203ENST00000471344 TEX13DA0A0J9YY54 714 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-203ENST00000471344 CRYM-AS1A6NIL9 109 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 DISC1C4P0D8 188 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 OPRK1P41145 380 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 NPBWR1P48145 328 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 AARDQ4LEZ3 155 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 TMEM268Q5VZI3 342 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 ZNF600Q6ZNG1 722 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 Q6ZWC4 215 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 LYG2Q86SG7 212 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 WFDC3Q8IUB2 231 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 FAM219AQ8IW50 185 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 RBPMSQ93062 196 aaKnown RBP11.32□□□□□ -0.6
COL1A1-203ENST00000471344 GPR146Q96CH1 333 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 CACNG5Q9UF02 275 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 GPR132Q9UNW8 380 aa11.32□□□□□ -0.6
COL1A1-203ENST00000471344 DFFBO76075 338 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 SPCS3P61009 180 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 SPANXN2Q5MJ10 180 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 TMEM170AQ8WVE7 144 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 RNF183Q96D59 192 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 GALNT14Q96FL9 552 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 PRRT1Q99946 306 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 GINS3Q9BRX5 216 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 MS4A6AQ9H2W1 248 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 TP53TG1Q9Y2A0 90 aa11.31□□□□□ -0.6
COL1A1-203ENST00000471344 KIR2DL5BA0A0G2JN68 375 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 KIR2DL5BA0A0G2JPC4 375 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 CORTO00230 105 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 CLN5O75503 358 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 IGKV1-17P01599 117 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 BMI1P35226 326 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL1A1-203ENST00000471344 TIGITQ495A1 244 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 KIR2DL5AQ8N109 375 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 KIR2DL5BQ8NHK3 375 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-203ENST00000471344 MCUBQ9NWR8 336 aa11.3□□□□□ -0.6
COL1A1-203ENST00000471344 JTBO76095 146 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 DHODHQ02127 395 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 TNFRSF9Q07011 255 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 TMEM187Q14656 261 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 TOMM5Q8N4H5 51 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 OR4X1Q8NH49 305 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 OR52E5Q8NH55 327 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 HEYLQ9NQ87 328 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-203ENST00000471344 TMEM56-RWDD3S4R434 201 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 BIRC6Q9NR09 4857 aa11.29□□□□□ -0.6
COL1A1-203ENST00000471344 LINC00854A0A1B0GVQ3 168 aa11.28□□□□□ -0.6
COL1A1-203ENST00000471344 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
COL1A1-203ENST00000471344 UBE2CO00762 179 aa11.28□□□□□ -0.6
COL1A1-203ENST00000471344 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
COL1A1-203ENST00000471344 SUPT4H1P63272 117 aaKnown RBP11.28□□□□□ -0.6
COL1A1-203ENST00000471344 SCP2D1Q9UJQ7 156 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms