RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ABHD5Q8WTS1 349 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 CACNG8Q8WXS5 425 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 DCUN1D4Q92564 292 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 HIPK2Q9H2X6 1198 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 FBXL17Q9UF56 701 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 VWFP04275 2813 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 FXYD6-FXYD2A0A087WZ82 144 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 FAM223BA6NKX1 122 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 BMPR1BO00238 502 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 ARPC5O15511 151 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 CDX1P47902 265 aaPredicted RBP7.59□□□□□ -1.19
SF3A1-207ENST00000471342 EIF2B2P49770 351 aaKnown RBP7.59□□□□□ -1.19
SF3A1-207ENST00000471342 CAV2P51636 162 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 RPL23AP62750 156 aaKnown RBP7.59□□□□□ -1.19
SF3A1-207ENST00000471342 FGL1Q08830 312 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 ZNF345Q14585 488 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 TEX38Q6PEX7 206 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 IL34Q6ZMJ4 242 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 ADAMTSL5Q6ZMM2 481 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 SLC16A13Q7RTY0 426 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 FAM223AQ8IWN6 122 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 OR5C1Q8NGR4 320 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 NPIPB3Q92617 1050 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 UBE2E2Q96LR5 201 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 C17orf77Q96MU5 243 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 MGST2Q99735 147 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 GGACTQ9BVM4 153 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 ZFP57Q9NU63 452 aa7.59□□□□□ -1.19
SF3A1-207ENST00000471342 IGHV3-11P01762 117 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 TRGV3P03979 118 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 CLEC3BP05452 202 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 CRYBA1P05813 215 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 PF4V1P10720 104 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 HIST1H1BP16401 226 aaKnown RBP7.58□□□□□ -1.2
SF3A1-207ENST00000471342 EDN2P20800 178 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 PRR20EP86478 221 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 PRR20CP86479 221 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 PRR20DP86480 221 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 PRR20BP86481 221 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 PRR20AP86496 221 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 BAXQ07812 192 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 SLC38A11Q08AI6 406 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 OR2F1Q13607 317 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 RPL7L1Q6DKI1 246 aaKnown RBP7.58□□□□□ -1.2
SF3A1-207ENST00000471342 OR8G2PQ6IF36 304 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 TMEM144Q7Z5S9 345 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 COMMD1Q8N668 190 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 TMEM217Q8N7C4 229 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 C11orf44Q8N8P7 122 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 OR1L6Q8NGR2 347 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 THAP6Q8TBB0 222 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 MISP3Q96FF7 219 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 USMG5Q96IX5 58 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 HYLS1Q96M11 299 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 ATP6V0BQ99437 205 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 PARD6GQ9BYG4 376 aaPredicted RBP7.58□□□□□ -1.2
SF3A1-207ENST00000471342 MFFQ9GZY8 342 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 SLA2Q9H6Q3 261 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 SLC45A2Q9UMX9 530 aa7.58□□□□□ -1.2
SF3A1-207ENST00000471342 STAB1Q9NY15 2570 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 PPP5D1E7EU14 171 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 CLN5O75503 358 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 YIF1AO95070 293 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 CFDP00746 253 aaPredicted RBP7.57□□□□□ -1.2
SF3A1-207ENST00000471342 RLN2P04090 185 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 GATA2P23769 480 aaPredicted RBP7.57□□□□□ -1.2
SF3A1-207ENST00000471342 S100A11P31949 105 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 SNCAP37840 140 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 RND2P52198 227 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 TPPP2P59282 170 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 ZNF90Q03938 601 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 UNQ9165/PRO28630Q6UXU0 137 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 PATE2Q6UY27 113 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 TMUB2Q71RG4 321 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 RAX2Q96IS3 184 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 ZNF747Q9BV97 191 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 WDR61Q9GZS3 305 aaKnown RBP7.57□□□□□ -1.2
SF3A1-207ENST00000471342 ZFAND3Q9H8U3 227 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 C21orf62Q9NYP8 219 aa7.57□□□□□ -1.2
SF3A1-207ENST00000471342 IGHV4OR15-8A0A075B7B6 117 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 A0A087WW49 117 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 A0A1B0GUS0 222 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 WI2-2373I1.2A0A1W2PRP0 233 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 L7N2F9 121 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 CORTO00230 105 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 IFNA4P05014 189 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 LGALS1P09382 135 aaKnown RBP7.56□□□□□ -1.2
SF3A1-207ENST00000471342 OR8U8P0C7N1 319 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 VAMP2P63027 116 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 ATP5G2Q06055 141 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 FOXL1Q12952 345 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 EXOSC2Q13868 293 aaKnown RBP7.56□□□□□ -1.2
SF3A1-207ENST00000471342 KLF5Q13887 457 aaPredicted RBP7.56□□□□□ -1.2
SF3A1-207ENST00000471342 DEFB136Q30KP8 78 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 TIGITQ495A1 244 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 ZFP69Q49AA0 526 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 CLEC19AQ6UXS0 136 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 OR10P1Q8NGE3 313 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 OR4X2Q8NGF9 303 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 C4orf3Q8WVX3 66 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms