RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 OR51H1Q8NH63 302 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 ACY3Q96HD9 319 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 MED28Q9H204 178 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 CENPHQ9H3R5 247 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 DPH3P1Q9H4G8 78 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 RPRD1BQ9NQG5 326 aaKnown RBP0□□□□□ -2.41
UBXN4-207ENST00000471246 IBTKQ9P2D0 1353 aaPredicted RBP0□□□□□ -2.41
UBXN4-207ENST00000471246 SNX24Q9Y343 169 aa0□□□□□ -2.41
UBXN4-207ENST00000471246 MYO5AQ9Y4I1 1855 aaKnown RBP0□□□□□ -2.41
UBXN4-207ENST00000471246 ATG2AQ2TAZ0 1938 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 CDK5RAP2Q96SN8 1893 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 PATJQ8NI35 1801 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 DOCK2Q92608 1830 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 SIPA1L3O60292 1781 aaPredicted RBP-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 MAST2Q6P0Q8 1798 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 CEP152O94986 1710 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ABCA9Q8IUA7 1624 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 LMTK2Q8IWU2 1503 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ABCA10Q8WWZ4 1543 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 SYCP2Q9BX26 1530 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 CPDO75976 1380 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 C5orf49A4QMS7 147 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 NUPR2A6NF83 97 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 EFCAB9A8MZ26 197 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 C5orf67F2Z3F1 127 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ORC5O43913 435 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 IFNA6P05013 189 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 HSPA9P38646 679 aaKnown RBP-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 CA7P43166 264 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 STC1P52823 247 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 TCTAP57738 103 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 OR10A3P58181 314 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 GNA12Q03113 381 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ELOBQ15370 118 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 VAMP3Q15836 100 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 USF2Q15853 346 aaPredicted RBP-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 NKAIN1Q4KMZ8 207 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 OR10J3Q5JRS4 329 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 FAM173BQ6P4H8 233 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 TTC33Q6PID6 262 aaPredicted RBP-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 AHSA2Q719I0 299 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 DCXRQ7Z4W1 244 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 SLC13A5Q86YT5 568 aaPredicted RBP-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 TEX29Q8N6K0 151 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 PACRGLQ8N7B6 248 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ZNF321PQ8N8H1 164 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 TNFAIP8L1Q8WVP5 186 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 IFT81Q8WYA0 676 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 TAMM41Q96BW9 452 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 SFRP2Q96HF1 295 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 MRPL57Q9BQC6 102 aaKnown RBP-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 GNB1LQ9BYB4 327 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 REG4Q9BYZ8 158 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 NCOR1P1Q9H4R4 102 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ASCL3Q9NQ33 180 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 MS4A12Q9NXJ0 267 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 CLEC2DQ9UHP7 191 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 NXT1Q9UKK6 140 aaKnown RBP-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 SNX10Q9Y5X0 201 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 DOCK3Q8IZD9 2030 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 BTAF1O14981 1849 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 ZNF236Q9UL36 1845 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 A0A1B0GUL6 1792 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 MYO5CQ9NQX4 1742 aa-0.01□□□□□ -2.41
UBXN4-207ENST00000471246 FAM208AQ9UK61 1670 aaKnown RBP-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 DUOX1Q9NRD9 1551 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CCDC141Q6ZP82 1450 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 RTL1A6NKG5 1358 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 A0A0D9SEW6 157 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 A0A1B0GX12 115 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 H7C2G1 150 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 C19orf84I3L1E1 186 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 M0QYV0 167 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CRXO43186 299 aaPredicted RBP-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 GSTZ1O43708 216 aaPredicted RBP-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 ASS1P00966 412 aaKnown RBP-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 IFNA5P01569 189 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 PRH1P02810 166 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 DEFA4P12838 97 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 AGTR1P30556 359 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 OR10J1P30954 320 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 SRP14P37108 136 aaKnown RBP-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CD79BP40259 229 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 GABRA2P47869 451 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 REG1BP48304 166 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 ETV1P50549 477 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CDK9P50750 372 aaKnown RBP-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 FXYD7P58549 80 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 HERVK_113P63121 156 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 C1DQ13901 141 aaKnown RBP-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 MIAQ16674 131 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 KRTAP19-2Q3LHN2 52 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 MESTQ5EB52 335 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 C1orf134Q5TEV5 83 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 SPATA8Q6RVD6 105 aa-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 MRPL52Q86TS9 123 aaKnown RBP-0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CDRT4Q8N9R6 151 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms