RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 OR5AC2Q9NZP5 309 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 U3KQ87 197 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 LYSTQ99698 3801 aa6.97□□□□□ -1.29
SF3A1-206ENST00000471037 SORL1Q92673 2214 aa6.96□□□□□ -1.29
SF3A1-206ENST00000471037 FXYD6-FXYD2A0A087WZ82 144 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 A0A1B0GW64 132 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 MSGN1A6NI15 193 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 HMSDA8MTL9 139 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 E7EUB6 86 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 LINC01619G3V211 115 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 TMEM50AO95807 157 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 LGALS1P09382 135 aaKnown RBP6.96□□□□□ -1.3
SF3A1-206ENST00000471037 OR13C7P0DN81 318 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 NUP62P37198 522 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-206ENST00000471037 HTR2BP41595 481 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 CAV2P51636 162 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 PAX9P55771 341 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 TMEM267Q0VDI3 215 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-206ENST00000471037 ZNF546Q86UE3 836 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 NOXA1Q86UR1 476 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 OR2C3Q8N628 320 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 INO80EQ8NBZ0 244 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-206ENST00000471037 SLC24A4Q8NFF2 622 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 OR10W1Q8NGF6 305 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 SLC25A31Q9H0C2 315 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 EDA2RQ9HAV5 297 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 PARP11Q9NR21 331 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 LYRM2Q9NU23 88 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-206ENST00000471037 GAR1Q9NY12 217 aaKnown RBP6.96□□□□□ -1.3
SF3A1-206ENST00000471037 STRAPQ9Y3F4 350 aaKnown RBP6.96□□□□□ -1.3
SF3A1-206ENST00000471037 STARD9Q9P2P6 4700 aa6.96□□□□□ -1.3
SF3A1-206ENST00000471037 NPIPB5A8MRT5 1133 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 A8MZ25 164 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 SOX15O60248 233 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 IFNA10P01566 189 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 EGR2P11161 476 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-206ENST00000471037 NPY1RP25929 384 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 SNCAP37840 140 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 SUB1P53999 127 aaKnown RBP eCLIP6.95□□□□□ -1.3
SF3A1-206ENST00000471037 SLURP1P55000 103 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 RAB11AP62491 216 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 WT1-ASQ06250 92 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 BAXQ07812 192 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 BSXQ3C1V8 233 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 AKIRIN2Q53H80 203 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 SPANXN5Q5MJ07 72 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 ZNF114Q8NC26 417 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 OR11H4Q8NGC9 324 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 OR1L6Q8NGR2 347 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 AQP10Q96PS8 301 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 FAM103A1Q9BTL3 118 aaKnown RBP6.95□□□□□ -1.3
SF3A1-206ENST00000471037 TNFSF18Q9UNG2 199 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 FBXO7Q9Y3I1 522 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 CSMD3Q7Z407 3707 aa6.95□□□□□ -1.3
SF3A1-206ENST00000471037 IGHV4OR15-8A0A075B7B6 117 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 A0A087WW49 117 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 FAM24AA6NFZ4 105 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 C15orf62A8K5M9 175 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 H3BP45 60 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 CORTO00230 105 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 ARPC5O15511 151 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 CYB5BO43169 146 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 CRYGCP07315 174 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 HNRNPCP07910 306 aaKnown RBP eCLIP6.94□□□□□ -1.3
SF3A1-206ENST00000471037 RNASE2P10153 161 aaKnown RBP6.94□□□□□ -1.3
SF3A1-206ENST00000471037 AREGP15514 252 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 CTRB1P17538 263 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 RPL12P30050 165 aaKnown RBP6.94□□□□□ -1.3
SF3A1-206ENST00000471037 OR2F1Q13607 317 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 ZNF345Q14585 488 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 ECSCRQ19T08 205 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 C2orf83Q53S99 150 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 CTRB2Q6GPI1 263 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 UNQ5815/PRO19632Q6UWF5 114 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 TMEM14EPQ6UXP3 125 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 ACOT7LQ6ZUV0 252 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 STX12Q86Y82 276 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 TTC9CQ8N5M4 171 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 TMEM252Q8N6L7 170 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 LFNGQ8NES3 379 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 OR1P1Q8NH06 330 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 OR4C12Q96R67 309 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 ZC4H2Q9NQZ6 224 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 C19orf73Q9NVV2 129 aa6.94□□□□□ -1.3
SF3A1-206ENST00000471037 F11RQ9Y624 299 aaKnown RBP6.94□□□□□ -1.3
SF3A1-206ENST00000471037 A0A0D9SG52 128 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 IGSF23A1L1A6 192 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 RNF222A6NCQ9 220 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 BOLA2-SMG1P6H3BVE0 249 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 IGLV1-51P01701 117 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 REG1AP05451 166 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 METTL15P1P0C7V9 234 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 APELAP0DMC3 54 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 IGHV4-30-4P0DP06 118 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 SULT1A1P50225 295 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 HBG1P69891 147 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 HBG2P69892 147 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 EWSR1Q01844 656 aaKnown RBP eCLIP6.93□□□□□ -1.3
SF3A1-206ENST00000471037 EXOSC2Q13868 293 aaKnown RBP6.93□□□□□ -1.3
SF3A1-206ENST00000471037 PVRIGQ6DKI7 326 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms