RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 TMEM133Q9H2Q1 129 aa4.58□□□□□ -1.68
HDAC8-216ENST00000470998 TMEM167BQ9NRX6 74 aa4.58□□□□□ -1.68
HDAC8-216ENST00000470998 DOK5Q9P104 306 aa4.58□□□□□ -1.68
HDAC8-216ENST00000470998 NAT8Q9UHE5 227 aa4.58□□□□□ -1.68
HDAC8-216ENST00000470998 ACANP16112 2415 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 HIVEP2P31629 2446 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 TRBV24-1A0A075B6N3 115 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 IGHV4-30-2A0A087WSY4 118 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 MEX3AA1L020 520 aaKnown RBP4.57□□□□□ -1.68
HDAC8-216ENST00000470998 NUPL2O15504 423 aaKnown RBP4.57□□□□□ -1.68
HDAC8-216ENST00000470998 OR2C1O95371 312 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 TFF1P04155 84 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 S100A8P05109 93 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 LIPFP07098 398 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 STAG3L2P0CL84 134 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 STAG3L3P0CL85 134 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 AREGP15514 252 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 RAB5AP20339 215 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 CEACAM3P40198 252 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 RND2P52198 227 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 B2MP61769 119 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 CCL20P78556 96 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 CD69Q07108 199 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 PQLC2Q6ZP29 291 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 C1orf122Q6ZSJ8 110 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 ABHD12Q8N2K0 398 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 Q8N7P7 452 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 STXBP6Q8NFX7 210 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 OR1L6Q8NGR2 347 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 RPUSD4Q96CM3 377 aaKnown RBP4.57□□□□□ -1.68
HDAC8-216ENST00000470998 PFDN5Q99471 154 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 RARRES2Q99969 163 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 SMIM7Q9BQ49 75 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 CLEC7AQ9BXN2 247 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 MRPL20Q9BYC9 149 aaKnown RBP4.57□□□□□ -1.68
HDAC8-216ENST00000470998 SLC25A22Q9H936 323 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 YAE1D1Q9NRH1 226 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 NDUFA4L2Q9NRX3 87 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 CTSZQ9UBR2 303 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 CDC42EP3Q9UKI2 254 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 SLC45A2Q9UMX9 530 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 PUS1Q9Y606 427 aaKnown RBP eCLIP4.57□□□□□ -1.68
HDAC8-216ENST00000470998 PXMP4Q9Y6I8 212 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 LY96Q9Y6Y9 160 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 USF3Q68DE3 2245 aa4.57□□□□□ -1.68
HDAC8-216ENST00000470998 NAV3Q8IVL0 2385 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 TRAV9-1A0A075B6T8 112 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 A0A096LNT2 108 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 IGHV2-26A0A0B4J1V2 119 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 PPIAL4CA0A0B4J2A2 164 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 ZNF727A8MUV8 499 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 C11orf94C9JXX5 98 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 RRHO14718 337 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 NDUFS7O75251 213 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 ACTL6BO94805 426 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 CA2P00918 260 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 IGKV1D-33P01593 117 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 IGKV1-33P01594 117 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 IGLV1-47P01700 117 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 CRYBA1P05813 215 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 S100A6P06703 90 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 FABP1P07148 127 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 PPIAL4GP0DN37 164 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 CCL3L1P16619 93 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 S100PP25815 95 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 PDLIM4P50479 330 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 BPIFB3P59826 476 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 RPL19P84098 196 aaKnown RBP4.56□□□□□ -1.68
HDAC8-216ENST00000470998 HOXA4Q00056 320 aaPredicted RBP4.56□□□□□ -1.68
HDAC8-216ENST00000470998 TMEM241Q24JQ0 296 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 WDR25Q64LD2 544 aaPredicted RBP4.56□□□□□ -1.68
HDAC8-216ENST00000470998 CYB5R2Q6BCY4 276 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 PVRIGQ6DKI7 326 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 FAM53AQ6NSI3 398 aaPredicted RBP4.56□□□□□ -1.68
HDAC8-216ENST00000470998 CCDC144NLQ6NUI1 221 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 DUX4L9Q6RFH8 374 aaPredicted RBP4.56□□□□□ -1.68
HDAC8-216ENST00000470998 S100A7AQ86SG5 101 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 LY6G5BQ8NDX9 201 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 OR4P4Q8NGL7 312 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 OR1L4Q8NGR5 311 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 C10orf105Q8TEF2 133 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 GATAD1Q8WUU5 269 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 C11orf52Q96A22 123 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 AJUBAQ96IF1 538 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 UHRF2Q96PU4 802 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 OR5B12Q96R08 314 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 IMMP2LQ96T52 175 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 MGST2Q99735 147 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 PIMREGQ9BSJ6 248 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 SDF2L1Q9HCN8 221 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 RNF24Q9Y225 148 aa4.56□□□□□ -1.68
HDAC8-216ENST00000470998 FN1P02751 2386 aaKnown RBP4.56□□□□□ -1.68
HDAC8-216ENST00000470998 SETD2Q9BYW2 2564 aaPredicted RBP4.56□□□□□ -1.68
HDAC8-216ENST00000470998 TEX50A0A1B0GTY4 177 aa4.55□□□□□ -1.68
HDAC8-216ENST00000470998 A0A1B0GV50 99 aa4.55□□□□□ -1.68
HDAC8-216ENST00000470998 VWC2LB2RUY7 222 aa4.55□□□□□ -1.68
HDAC8-216ENST00000470998 SCGB2A1O75556 95 aa4.55□□□□□ -1.68
HDAC8-216ENST00000470998 MMP23AO75900 390 aa4.55□□□□□ -1.68
HDAC8-216ENST00000470998 IGKV1-16P04430 117 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms