RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 CD81P60033 236 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 UBE2MP61081 183 aaKnown RBP10.63□□□□□ -0.71
TOP3B-215ENST00000470338 TNFRSF9Q07011 255 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 PPP1R1AQ13522 171 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 MLANAQ16655 118 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 GUCA2BQ16661 112 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 BTNL8Q6UX41 500 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 OR10C1Q96KK4 312 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 NEURL2Q9BR09 285 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 C7orf50Q9BRJ6 194 aaKnown RBP10.63□□□□□ -0.71
TOP3B-215ENST00000470338 SELENOKQ9Y6D0 94 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 U3KQK5 164 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 PITX3O75364 302 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 CD7P09564 240 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 VAMP1P23763 118 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 BTCP35070 178 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 LINC00299Q6ZSB3 139 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 OR4X1Q8NH49 305 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 TMEM170AQ8WVE7 144 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 C20orf24Q9BUV8 137 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 HIPK2Q9H2X6 1198 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 MRPL36Q9P0J6 103 aaKnown RBP10.62□□□□□ -0.71
TOP3B-215ENST00000470338 STAB2Q8WWQ8 2551 aa10.62□□□□□ -0.71
TOP3B-215ENST00000470338 TENM3Q9P273 2699 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 IGHV3OR16-8A0A075B7F1 116 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 A6NHS1 94 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 CENPXA8MT69 81 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 CLN5O75503 358 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 NXPH3O95157 252 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 SLC25A6P12236 298 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 OPRK1P41145 380 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 RBPMS2Q6ZRY4 209 aaKnown RBP10.61□□□□□ -0.71
TOP3B-215ENST00000470338 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 RNASEH2CQ8TDP1 164 aaKnown RBP10.61□□□□□ -0.71
TOP3B-215ENST00000470338 RBKSQ9H477 322 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 SMPXQ9UHP9 88 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 TMED3Q9Y3Q3 217 aa10.61□□□□□ -0.71
TOP3B-215ENST00000470338 IGHV7-4-1A0A0J9YVY3 117 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 LINC00854A0A1B0GVQ3 168 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 PLA2G10O15496 165 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 ZNF207O43670 478 aaKnown RBP10.6□□□□□ -0.71
TOP3B-215ENST00000470338 YIF1AO95070 293 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 SCAF4O95104 1147 aaKnown RBP10.6□□□□□ -0.71
TOP3B-215ENST00000470338 TOMM20LQ6UXN7 152 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 LINC00322Q6ZN03 302 aaPredicted RBP10.6□□□□□ -0.71
TOP3B-215ENST00000470338 ZNF600Q6ZNG1 722 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 NOXA1Q86UR1 476 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 OR1S1Q8NH92 325 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 DTD1Q8TEA8 209 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 TM2D3Q9BRN9 247 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 TUBA4BQ9H853 241 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 FLVCR2Q9UPI3 526 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 U3KQ87 197 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 NBEAL2Q6ZNJ1 2754 aa10.6□□□□□ -0.71
TOP3B-215ENST00000470338 TRAV14DV4A0A0A6YYC5 116 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 RPS10-NUDT3A0A1W2PQS6 291 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 C9orf170A2RU37 121 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 OR11H12B2RN74 326 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 TSPAN4O14817 238 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 SLC25A4P12235 298 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 NPY1RP25929 384 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 ATP5IP56385 69 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-215ENST00000470338 CNPY1Q3B7I2 92 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 LAMTOR1Q6IAA8 161 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 SLC16A13Q7RTY0 426 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 DEFB125Q8N687 156 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 TMEM116Q8NCL8 245 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 WWC2-AS2Q96NR7 200 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 SPAG8Q99932 426 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-215ENST00000470338 ZFAND3Q9H8U3 227 aa10.59□□□□□ -0.71
TOP3B-215ENST00000470338 TRAV30A0A087WSZ9 112 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 FAM90A26D6RGX4 464 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 CHEK1O14757 476 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 IFNA10P01566 189 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 IGKV1-17P01599 117 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 OR4E1P0C645 316 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 HAGHQ16775 308 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 ETFRF1Q6IPR1 90 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 PRSS54Q6PEW0 395 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 OR52B4Q8NGK2 314 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 GINS3Q9BRX5 216 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 RHPN1-AS1Q9BWJ2 59 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 WFDC10AQ9H1F0 79 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 ZMAT4Q9H898 229 aa10.58□□□□□ -0.72
TOP3B-215ENST00000470338 PUS1Q9Y606 427 aaKnown RBP eCLIP10.58□□□□□ -0.72
TOP3B-215ENST00000470338 LYRM1O43325 122 aa10.57□□□□□ -0.72
TOP3B-215ENST00000470338 HOXB5P09067 269 aa10.57□□□□□ -0.72
TOP3B-215ENST00000470338 DHRS2Q13268 280 aa10.57□□□□□ -0.72
TOP3B-215ENST00000470338 GGNBP1Q5YKI7 109 aa10.57□□□□□ -0.72
TOP3B-215ENST00000470338 LYG2Q86SG7 212 aa10.57□□□□□ -0.72
TOP3B-215ENST00000470338 RCHY1Q96PM5 261 aa10.57□□□□□ -0.72
TOP3B-215ENST00000470338 RNF2Q99496 336 aa10.57□□□□□ -0.72
TOP3B-215ENST00000470338 CCDC32Q9BV29 185 aa10.57□□□□□ -0.72
TOP3B-215ENST00000470338 RBMY1BA6NDE4 496 aaKnown RBP10.56□□□□□ -0.72
TOP3B-215ENST00000470338 RBMY1EA6NEQ0 496 aaKnown RBP10.56□□□□□ -0.72
TOP3B-215ENST00000470338 SCGB2A1O75556 95 aa10.56□□□□□ -0.72
TOP3B-215ENST00000470338 RBMY1DP0C7P1 496 aaKnown RBP10.56□□□□□ -0.72
TOP3B-215ENST00000470338 IGLC1P0CG04 106 aa10.56□□□□□ -0.72
TOP3B-215ENST00000470338 ANXA7P20073 488 aaKnown RBP10.56□□□□□ -0.72
TOP3B-215ENST00000470338 RND2P52198 227 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms