RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 TGOLN2O43493 480 aa11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 TSC22D2O75157 780 aa11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 TMEM50AO95807 157 aa11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 CLEC3BP05452 202 aa11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 ARL3P36405 182 aa11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 SLURP1P55000 103 aa11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 MFAP4P55083 255 aa11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 H2BFSP57053 126 aa11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 CYCSP99999 105 aaKnown RBP11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 KLF5Q13887 457 aaPredicted RBP11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 ETFRF1Q6IPR1 90 aa11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 MCRIP2Q9BUT9 160 aaKnown RBP11.45□□□□□ -0.58
CDC42SE1-203ENST00000470278 IGHV3-21A0A0B4J1V1 117 aa11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 K7EPK0 472 aa11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 SLC25A4P12235 298 aa11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 NPBWR1P48145 328 aa11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 PAX9P55771 341 aa11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 RAB11AP62491 216 aa11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 OR4X1Q8NH49 305 aa11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 DCUN1D4Q92564 292 aa11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 DLX4Q92988 240 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 OR4C12Q96R67 309 aa11.44□□□□□ -0.58
CDC42SE1-203ENST00000470278 OR2T8A6NH00 312 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 PRSS46E5RG02 174 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 OVOL1O14753 267 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 IFNA4P05014 189 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 CD69Q07108 199 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 RAB32Q13637 225 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 Q56UQ5 140 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 SPANXN5Q5MJ07 72 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 ACSM6Q6P461 480 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 TMEM14EPQ6UXP3 125 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 GPHB5Q86YW7 130 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 UBAC2Q8NBM4 344 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 TMEM116Q8NCL8 245 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 CACNG8Q8WXS5 425 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 GPR61Q9BZJ8 451 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 C11orf1Q9H5F2 150 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 PSENENQ9NZ42 101 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 MGAT4CQ9UBM8 478 aa11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 STRAPQ9Y3F4 350 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-203ENST00000470278 H3BP45 60 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 LGALS9O00182 355 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 NUPL2O15504 423 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 GNG7O60262 68 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 CLN5O75503 358 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 SIX6O95475 246 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 CTSGP08311 255 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 ADMP35318 185 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 GPX4P36969 197 aaPredicted RBP11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 BEAN1Q3B7T3 259 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 KPRPQ5T749 579 aaPredicted RBP11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 PRSS54Q6PEW0 395 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 SLC16A13Q7RTY0 426 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 REC114Q7Z4M0 266 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 OR9G4Q8NGQ1 327 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 CHRDL1Q9BU40 450 aa11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 ZNF436Q9C0F3 470 aaPredicted RBP11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 MRPL36Q9P0J6 103 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-203ENST00000470278 A8MWP6 167 aa11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 SCGB2A1O75556 95 aa11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 DEDDO75618 318 aa11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 SCAF4O95104 1147 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 OR2C1O95371 312 aa11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 PVALBP20472 110 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 SYNJ2BPP57105 145 aa11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 S100A10P60903 97 aa11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 RELQ04864 619 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 SAMD5Q5TGI4 173 aa11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 ASB13Q8WXK3 278 aa11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 MED28Q9H204 178 aa11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 LSM5Q9Y4Y9 91 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-203ENST00000470278 TRAV30A0A087WSZ9 112 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 PMS2P5A8MQ11 134 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 G3V4G9 280 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 L7N2F9 121 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 NDUFA4O00483 81 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 IGLL1P15814 213 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 CXCL3P19876 107 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 INSL3P51460 131 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 RND2P52198 227 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 RRAS2P62070 204 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 VAMP2P63027 116 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 MLANAQ16655 118 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 FAM106AQ4KMX7 169 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 OR11H7Q8NGC8 314 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 PPP1R1CQ8WVI7 109 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 TMEM190Q8WZ59 177 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 ZNF414Q96IQ9 312 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 ZC4H2Q9NQZ6 224 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 SIGLEC8Q9NYZ4 499 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 PEMTQ9UBM1 199 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 DNAH9Q9NYC9 4486 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 RYR3Q15413 4870 aa11.4□□□□□ -0.58
CDC42SE1-203ENST00000470278 TENM3Q9P273 2699 aa11.4□□□□□ -0.59
CDC42SE1-203ENST00000470278 SEC14L6B5MCN3 397 aa11.39□□□□□ -0.59
CDC42SE1-203ENST00000470278 PRB2P02812 416 aaPredicted RBP11.39□□□□□ -0.59
CDC42SE1-203ENST00000470278 IGLC1P0CG04 106 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms