RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 EAF1Q96JC9 268 aaPredicted RBP6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 GPHA2Q96T91 129 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 C12orf57Q99622 126 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 ABHD14AQ9BUJ0 271 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 SMDT1Q9H4I9 107 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 ZNF580Q9UK33 172 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR2W1Q9Y3N9 320 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 RBM7Q9Y580 266 aaKnown RBP6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 RFNGQ9Y644 331 aa6.87□□□□□ -1.31
SYNGAP1-205ENST00000470232 A0A0G2JRQ6 117 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 KBTBD11-OT1A0A1B0GTJ5 212 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 ODAMA1E959 279 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 S100A6P06703 90 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 SRP19P09132 144 aaKnown RBP6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 SLC25A6P12236 298 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 F2RP25116 425 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 CNTFRP26992 372 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 MEOX2P50222 304 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 TMEM267Q0VDI3 215 aaPredicted RBP6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 ZNF506Q5JVG8 444 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 Q6P435 159 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 SPSB3Q6PJ21 355 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 ODF3L1Q8IXM7 274 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 TMEM217Q8N7C4 229 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 Q8N9W7 124 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR51H1Q8NH63 302 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 SCGB1C1Q8TD33 95 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 MYOZ3Q8TDC0 251 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 GATAD1Q8WUU5 269 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR5B12Q96R08 314 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 RAB40CQ96S21 281 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 S1PR3Q99500 378 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 IFT22Q9H7X7 185 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 GNB4Q9HAV0 340 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR1A1Q9P1Q5 309 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 KIAA1456Q9P272 454 aa6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 PUS1Q9Y606 427 aaKnown RBP eCLIP6.86□□□□□ -1.31
SYNGAP1-205ENST00000470232 TRAV39A0A0B4J263 110 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 IGHV1-3A0A0C4DH29 117 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 C12orf77C9JDV5 145 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 NPIPB11E5RHQ5 1161 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR2C1O95371 312 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 TMEM50AO95807 157 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR2H2O95918 312 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 MOSP00540 346 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 IFNA17P01571 189 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 S100A9P06702 114 aaKnown RBP6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 IAPPP10997 89 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 RAB5AP20339 215 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 CD1BP29016 333 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 SULT1A1P50225 295 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 RAB9AP51151 201 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 CEBPGP53567 150 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 PAX9P55771 341 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 TAS2R30P59541 319 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 SNRPEP62304 92 aaKnown RBP6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 GNB1P62873 340 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 CCL20P78556 96 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 ZNF816Q0VGE8 651 aaPredicted RBP6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 ICAM4Q14773 271 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 ASPHD1Q5U4P2 390 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 GTSCR1Q86UQ5 136 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 OR10A7Q8NGE5 316 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 IL1F10Q8WWZ1 152 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 LSM10Q969L4 123 aaKnown RBP6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 FLYWCH2Q96CP2 140 aaKnown RBP6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 RARRES2Q99969 163 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 IDI2-AS1Q9NZ38 188 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 PSENENQ9NZ42 101 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 TRAPPC2LQ9UL33 140 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 PSG11Q9UQ72 335 aa6.85□□□□□ -1.31
SYNGAP1-205ENST00000470232 LOC102723971A0A1B0GUV8 181 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 H3BP45 60 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 TXNL1O43396 289 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 S100A8P05109 93 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 IL3RAP26951 378 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 SLURP1P55000 103 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 UBE2KP61086 200 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 KIAA0141Q14154 515 aaPredicted RBP6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 DIAPH2-AS1Q14236 149 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 Q8N6K4 173 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 ARPC1AQ92747 370 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 ISOC2Q96AB3 205 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 TVP23CQ96ET8 276 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 KLK15Q9H2R5 256 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 KCNIP1Q9NZI2 227 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 CACNG5Q9UF02 275 aa6.84□□□□□ -1.31
SYNGAP1-205ENST00000470232 TNCP24821 2201 aa6.84□□□□□ -1.32
SYNGAP1-205ENST00000470232 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.32
SYNGAP1-205ENST00000470232 IGHV3-72A0A0B4J1Y9 119 aa6.83□□□□□ -1.32
SYNGAP1-205ENST00000470232 TMEM30CPA0ZSE6 113 aa6.83□□□□□ -1.32
SYNGAP1-205ENST00000470232 H3BQ15 152 aa6.83□□□□□ -1.32
SYNGAP1-205ENST00000470232 UBE2CO00762 179 aa6.83□□□□□ -1.32
SYNGAP1-205ENST00000470232 SYNGR2O43760 224 aa6.83□□□□□ -1.32
SYNGAP1-205ENST00000470232 EIF3GO75821 320 aaKnown RBP eCLIP6.83□□□□□ -1.32
SYNGAP1-205ENST00000470232 IGKV1-39P01597 117 aa6.83□□□□□ -1.32
SYNGAP1-205ENST00000470232 IGLV1-40P01703 118 aa6.83□□□□□ -1.32
SYNGAP1-205ENST00000470232 IGHV3-7P01780 117 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms