RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, human

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP1-208	ENST00000470179	TECR	Q9NZ01	308 aa	Known RBP	13.65	□□□□□ -0.22
PGAP1-208	ENST00000470179	IGKV1D-17	A0A075B6S4	117 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	CD99	P14209	185 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	GNLY	P22749	145 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	TNXA	Q16473	311 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	C19orf35	Q6ZS72	473 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	LINC00173	Q6ZV60	143 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	PMCHL2	Q9BQD1	86 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	CDC42EP3	Q9UKI2	254 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	TOX4	O94842	621 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	REG1B	P48304	166 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	TEPP	Q6URK8	271 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	OR52E5	Q8NH55	327 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	TSKU	Q8WUA8	353 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	CUBN	O60494	3623 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	WNK2	Q9Y3S1	2297 aa		13.64	□□□□□ -0.23
PGAP1-208	ENST00000470179	PRB1	P04280	392 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	PRDX2	P32119	198 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	GNG5	P63218	68 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	OR4A47	Q6IF82	309 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	LYG1	Q8N1E2	194 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	OR2T6	Q8NHC8	308 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	ZNF586	Q9NXT0	402 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	IGHV3-21	A0A0B4J1V1	117 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	IGLC2	P0DOY2	106 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	IGLC3	P0DOY3	106 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	HNRNPA3	P51991	378 aa	Known RBP	13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	RAN	P62826	216 aa	Known RBP	13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	C1orf174	Q8IYL3	243 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	S1PR3	Q99500	378 aa		13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	LSM4	Q9Y4Z0	139 aa	Known RBP	13.63	□□□□□ -0.23
PGAP1-208	ENST00000470179	DPRX	A6NFQ7	191 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	SRRM4	A7MD48	611 aa	Known RBP	13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179		E7EUB6	86 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	SPINT2	O43291	252 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	NPY1R	P25929	384 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	CTRL	P40313	264 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	ZNF138	P52744	262 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	PTTG1IP	P53801	180 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	PAFAH1B2	P68402	229 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	TRAT1	Q6PIZ9	186 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	FAM169B	Q8N8A8	192 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	NABP2	Q9BQ15	211 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	NPVF	Q9HCQ7	196 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	LAMTOR2	Q9Y2Q5	125 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	LINC00869	P0C866	280 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	UQCRFS1	P47985	274 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	COL5A1-AS1	Q5SY13	56 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	RUSC1-AS1	Q66K80	236 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179		Q8IYB0	196 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	SLC24A4	Q8NFF2	622 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	IFI27L2	Q9H2X8	130 aa		13.62	□□□□□ -0.23
PGAP1-208	ENST00000470179	SAA2-SAA4	A0A096LPE2	208 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	SAA2	P0DJI9	122 aa	Predicted RBP	13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	FOXE3	Q13461	319 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	SSX8	Q7RTT4	187 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	NANOS1	Q8WY41	292 aa	Known RBP	13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	PLEKHA3	Q9HB20	300 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	ERVK-16	P61578	105 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	IBA57	Q5T440	356 aa	Known RBP	13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	ETFRF1	Q6IPR1	90 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	EBLN2	Q6P2I7	272 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	RNASEK	Q6P5S7	137 aa	Known RBP	13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	WDR31	Q8NA23	367 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	HES4	Q9HCC6	221 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	SNAI2	O43623	268 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	IGLV2-8	P01709	118 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	MFAP2	P55001	183 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	RHOB	P62745	196 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	C10orf55	Q5SWW7	151 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	NEUROG1	Q92886	237 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	RAB1C	Q92928	201 aa		13.61	□□□□□ -0.23
PGAP1-208	ENST00000470179	VWC2L	B2RUY7	222 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	SPRY3	O43610	288 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	ZNF324	O75467	553 aa	Predicted RBP	13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	CECR9	P0C854	216 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	USF1	P22415	310 aa	Predicted RBP	13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	DLX1	P56177	255 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	C3orf36	Q3SXR2	165 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	CT45A1	Q5HYN5	189 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	TIMM23B	Q5SRD1	257 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	CT45A3	Q8NHU0	189 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	PRR7	Q8TB68	274 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	ABCA4	P78363	2273 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	LOXL3	P58215	753 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	KCNS1	Q96KK3	526 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	ZFP30	Q9Y2G7	519 aa		13.6	□□□□□ -0.23
PGAP1-208	ENST00000470179	CELSR1	Q9NYQ6	3014 aa		13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179	IQCF6	A8MYZ5	107 aa		13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179	REG1A	P05451	166 aa		13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179	CX3CL1	P78423	397 aa		13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179	REL	Q04864	619 aa	Predicted RBP	13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179	MOGAT3	Q86VF5	341 aa		13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179		M0QZK8	103 aa		13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179	ZNF137P	P52743	207 aa		13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179	RNF2	Q99496	336 aa		13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179	HIVEP3	Q5T1R4	2406 aa		13.59	□□□□□ -0.23
PGAP1-208	ENST00000470179	ZBTB34	Q8NCN2	500 aa		13.58	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms