RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SCGB1C1Q8TD33 95 aa9.99□□□□□ -0.81
TRAF4-208ENST00000469529 TXN2Q99757 166 aa9.99□□□□□ -0.81
TRAF4-208ENST00000469529 TET2Q6N021 2002 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-208ENST00000469529 DNAJC9-AS1A6NH13 148 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 G3V318 75 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 K7EIM0 57 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 MT-CO2P00403 227 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 MLANAQ16655 118 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 TEPPQ6URK8 271 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 SLC16A13Q7RTY0 426 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 THAP8Q8NA92 274 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 NECAP1Q8NC96 275 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 OR5T1Q8NG75 326 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 OR2G3Q8NGZ4 309 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 LRRC20Q8TCA0 184 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 SCARB1Q8WTV0 552 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 ZNF702PQ9H963 129 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 ESM1Q9NQ30 184 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 PLXNB1O43157 2135 aa9.98□□□□□ -0.81
TRAF4-208ENST00000469529 SH2D7A6NKC9 451 aaPredicted RBP9.97□□□□□ -0.81
TRAF4-208ENST00000469529 UMAD1C9J7I0 102 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 IGHG4P01861 327 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 ATP6V0CP27449 155 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 OPRK1P41145 380 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 RAB5CP51148 216 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 RAB31Q13636 194 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 C9orf152Q5JTZ5 239 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 BTNL8Q6UX41 500 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 RNF152Q8N8N0 203 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 USMG5Q96IX5 58 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 SLC35E1Q96K37 410 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 C16orf95Q9H693 158 aa9.97□□□□□ -0.81
TRAF4-208ENST00000469529 TRAV30A0A087WSZ9 112 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 FAM223BA6NKX1 122 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 APELAP0DMC3 54 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 RPL29P47914 159 aaKnown RBP9.96□□□□□ -0.82
TRAF4-208ENST00000469529 ECSCRQ19T08 205 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 FAM223AQ8IWN6 122 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 OR2T6Q8NHC8 308 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 CXorf58Q96LI9 332 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 NPCDR1Q9BY65 106 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 SLC25A32Q9H2D1 315 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 GAR1Q9NY12 217 aaKnown RBP9.96□□□□□ -0.82
TRAF4-208ENST00000469529 SLC45A2Q9UMX9 530 aa9.96□□□□□ -0.82
TRAF4-208ENST00000469529 IGKV1OR2-108A0A075B7D4 117 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 C17orf112F2Z3M2 114 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 CLN5O75503 358 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 NPBWR1P48145 328 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 SULT1A2P50226 295 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 MFAP4P55083 255 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 SELENOTP62341 195 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 FAM209BQ5JX69 171 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 DPPA3Q6W0C5 159 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 COMMD1Q8N668 190 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 HSD17B11Q8NBQ5 300 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 RNF141Q8WVD5 230 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 NPIPB3Q92617 1050 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 SAT2Q96F10 170 aaPredicted RBP9.95□□□□□ -0.82
TRAF4-208ENST00000469529 MISP3Q96FF7 219 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 TRGV9Q99603 122 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 KCNIP2Q9NS61 270 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 SERTAD4Q9NUC0 356 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 UBQLN2Q9UHD9 624 aa9.95□□□□□ -0.82
TRAF4-208ENST00000469529 IGKV1D-37A0A075B6S9 117 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 UBE2L5PA0A1B0GUS4 154 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 FAM181BA6NEQ2 426 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 AGPAT2O15120 278 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 NDUFB8O95169 186 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 NDUFA7O95182 113 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 MBP02144 154 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 ELANEP08246 267 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 FGF7P21781 194 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 CAMLGP49069 296 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 RHOGP84095 191 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 PRR20EP86478 221 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 PRR20CP86479 221 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 PRR20DP86480 221 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 PRR20BP86481 221 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 PRR20AP86496 221 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 C19orf35Q6ZS72 473 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 ZNF709Q8N972 641 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 TMED6Q8WW62 240 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 WFDC12Q8WWY7 111 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 MGST2Q99735 147 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 C19orf24Q9BVV8 132 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 TNFRSF19Q9NS68 423 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 PLA2G2EQ9NZK7 142 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 MRPL36Q9P0J6 103 aaKnown RBP9.94□□□□□ -0.82
TRAF4-208ENST00000469529 FBXL7Q9UJT9 491 aa9.94□□□□□ -0.82
TRAF4-208ENST00000469529 FBN1P35555 2871 aaKnown RBP9.93□□□□□ -0.82
TRAF4-208ENST00000469529 TRBV7-1A0A0A6YYK4 115 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 A0A0G2JLM5 398 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 TCRBV4S1A1TA0A5B7 111 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 F8W735 103 aaPredicted RBP9.93□□□□□ -0.82
TRAF4-208ENST00000469529 PRH1P02810 166 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 LINC00869P0C866 280 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 PSMB8P28062 276 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 RAB9AP51151 201 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 RND2P52198 227 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 YPEL3P61236 119 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms