RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 H3BRM9 83 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 PHLDA2Q53GA4 152 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 SYT8Q8NBV8 401 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 OR8B3Q8NGG8 313 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 TIMM8BQ9Y5J9 83 aaPredicted RBP8.27□□□□□ -1.09
NUP50-214ENST00000469163 IGSF10Q6WRI0 2623 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 TRBV20-1A0A075B6N2 111 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 TRAV1-1A0A0B4J248 108 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 MLNRO43193 412 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 FRMD6-AS1P0C7T7 363 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 LINC00869P0C866 280 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 TBR1Q16650 682 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 CXorf66Q5JRM2 361 aaPredicted RBP8.27□□□□□ -1.09
NUP50-214ENST00000469163 FAM166AQ6J272 317 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 OR1F12Q8NHA8 337 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 OR2T6Q8NHC8 308 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 LINC01560Q8TB33 94 aa8.27□□□□□ -1.09
NUP50-214ENST00000469163 VDAC2P45880 294 aaPredicted RBP8.26□□□□□ -1.09
NUP50-214ENST00000469163 INSL3P51460 131 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 HERV-K104P61576 105 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 SLC35B1P78383 322 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 TSKUQ8WUA8 353 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 GATAD1Q8WUU5 269 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 GRAMD2BQ96HH9 432 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 SPRY4Q9C004 299 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 R4GMQ9 66 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 E9PLN8 166 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 GLRXP35754 106 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 PRB3Q04118 309 aaPredicted RBP8.26□□□□□ -1.09
NUP50-214ENST00000469163 EDDM3AQ14507 147 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 ACSM6Q6P461 480 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 PP6455Q8WZ26 134 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 TMEM250H0YL14 139 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 B3GALT5-AS1P59052 145 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 OR8B8Q15620 311 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 LRRC75BQ2VPJ9 315 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 TEX29Q8N6K0 151 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 DDB2Q92466 427 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 RNF166Q96A37 237 aaPredicted RBP8.26□□□□□ -1.09
NUP50-214ENST00000469163 USP24Q9UPU5 2620 aa8.26□□□□□ -1.09
NUP50-214ENST00000469163 TRGV10A0A0A0MS01 117 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 TMEM189A5PLL7 270 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 BMPR1BO00238 502 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 RHOBP62745 196 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 GRB2P62993 217 aaKnown RBP8.25□□□□□ -1.09
NUP50-214ENST00000469163 EBLN2Q6P2I7 272 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 RNASEKQ6P5S7 137 aaKnown RBP8.25□□□□□ -1.09
NUP50-214ENST00000469163 ZNF826PQ6ZT77 177 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 TPRX1Q8N7U7 411 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 C3orf56Q8N813 242 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 OR8B2Q96RD0 313 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 INSIG2Q9Y5U4 225 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 FAM181BA6NEQ2 426 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 CRYAAP02489 173 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 BLVRBP30043 206 aaPredicted RBP8.25□□□□□ -1.09
NUP50-214ENST00000469163 ZNF726P1Q15940 193 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 SAMD5Q5TGI4 173 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 ZFAND6Q6FIF0 208 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 RBMXL3Q8N7X1 1067 aaKnown RBP8.25□□□□□ -1.09
NUP50-214ENST00000469163 SLC25A22Q9H936 323 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 SPANXB1Q9NS25 103 aaPredicted RBP8.25□□□□□ -1.09
NUP50-214ENST00000469163 IL36GQ9NZH8 169 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 ARFGEF3Q5TH69 2177 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 ZNF503-AS2A6NEH8 195 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 FABP5P3A8MUU1 101 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 ADAM20O43506 726 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 PAGE4O60829 102 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 FAM214BQ7L5A3 538 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 MDS2Q8NDY4 140 aa8.25□□□□□ -1.09
NUP50-214ENST00000469163 OSR1Q8TAX0 266 aaPredicted RBP8.25□□□□□ -1.09
NUP50-214ENST00000469163 NEIL1Q96FI4 390 aaPredicted RBP8.25□□□□□ -1.09
NUP50-214ENST00000469163 HELZ2Q9BYK8 2649 aaKnown RBP8.24□□□□□ -1.09
NUP50-214ENST00000469163 SOCS1O15524 211 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 PHF1O43189 567 aaPredicted RBP8.24□□□□□ -1.09
NUP50-214ENST00000469163 TCTAP57738 103 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 UNC119Q13432 240 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 PLAC9Q5JTB6 97 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 OR10G9Q8NGN4 311 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 KCNG3Q8TAE7 436 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 ANXA10Q9UJ72 324 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 CRYBB3P26998 211 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 TAS2R46P59540 309 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 FOXI2Q6ZQN5 318 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 LRTM2Q8N967 370 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 OR10G8Q8NGN5 311 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 TMEM70Q9BUB7 260 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 MCRIP2Q9BUT9 160 aaKnown RBP8.24□□□□□ -1.09
NUP50-214ENST00000469163 OR2H1Q9GZK4 316 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 ATP23Q9Y6H3 246 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 SYNGR1O43759 233 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 RBM11P57052 281 aaKnown RBP8.24□□□□□ -1.09
NUP50-214ENST00000469163 CCL8P80075 99 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 SRSF1Q07955 248 aaKnown RBP eCLIP8.24□□□□□ -1.09
NUP50-214ENST00000469163 FAM201AQ5SY85 155 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 SP5Q6BEB4 398 aaPredicted RBP8.24□□□□□ -1.09
NUP50-214ENST00000469163 MSI2Q96DH6 328 aaKnown RBP8.24□□□□□ -1.09
NUP50-214ENST00000469163 FAM234AQ9H0X4 552 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 SVEP1Q4LDE5 3571 aa8.24□□□□□ -1.09
NUP50-214ENST00000469163 VSIG8P0DPA2 414 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms