RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PBDC1Q9BVG4 233 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 MAP1LC3BQ9GZQ8 125 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 EIF5A2Q9GZV4 153 aaKnown RBP14.99□□□□□ -0.01
SMC4-209ENST00000468653 CREBBPQ92793 2442 aa14.99□□□□□ -0.01
SMC4-209ENST00000468653 CTXND1A0A1B0GTU2 59 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 SMAD7O15105 426 aaKnown RBP14.98□□□□□ -0.01
SMC4-209ENST00000468653 EGR2P11161 476 aaPredicted RBP14.98□□□□□ -0.01
SMC4-209ENST00000468653 FGF8P55075 233 aaPredicted RBP14.98□□□□□ -0.01
SMC4-209ENST00000468653 GUK1Q16774 197 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 GCSAMLQ5JQS6 135 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 LINC00052Q96N35 136 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 MRPL36Q9P0J6 103 aaKnown RBP14.98□□□□□ -0.01
SMC4-209ENST00000468653 PITPNC1Q9UKF7 332 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 A0A1W2PPV4 95 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 A6NDX4 124 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 SH2D7A6NKC9 451 aaPredicted RBP14.98□□□□□ -0.01
SMC4-209ENST00000468653 ZFP92A6NM28 416 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 ZP3P21754 424 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 CDC34P49427 236 aaPredicted RBP14.98□□□□□ -0.01
SMC4-209ENST00000468653 PRR20EP86478 221 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 PRR20CP86479 221 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 PRR20DP86480 221 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 PRR20BP86481 221 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 PRR20AP86496 221 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 DEFB112Q30KQ8 113 aa14.98□□□□□ -0.01
SMC4-209ENST00000468653 BCL6BQ8N143 479 aaPredicted RBP14.98□□□□□ -0.01
SMC4-209ENST00000468653 CIARTQ8N365 385 aaPredicted RBP14.98□□□□□ -0.01
SMC4-209ENST00000468653 MDFIC2A0A1B0GVS7 189 aa14.97□□□□□ -0.01
SMC4-209ENST00000468653 ATP6V0E1O15342 81 aa14.97□□□□□ -0.01
SMC4-209ENST00000468653 EIF3GO75821 320 aaKnown RBP eCLIP14.97□□□□□ -0.018e-13■■■■■ 59.2
SMC4-209ENST00000468653 PEA15Q15121 130 aa14.97□□□□□ -0.01
SMC4-209ENST00000468653 CYP2G1PQ6ZSU1 146 aa14.97□□□□□ -0.01
SMC4-209ENST00000468653 THAP8Q8NA92 274 aa14.97□□□□□ -0.01
SMC4-209ENST00000468653 OR5T1Q8NG75 326 aa14.97□□□□□ -0.01
SMC4-209ENST00000468653 SGMS2Q8NHU3 365 aa14.97□□□□□ -0.01
SMC4-209ENST00000468653 RAB24Q969Q5 203 aa14.97□□□□□ -0.01
SMC4-209ENST00000468653 CSPG4Q6UVK1 2322 aa14.97□□□□□ -0.01
SMC4-209ENST00000468653 I3L2K1 104 aa14.96□□□□□ -0.01
SMC4-209ENST00000468653 HMGB3O15347 200 aaKnown RBP14.96□□□□□ -0.01
SMC4-209ENST00000468653 FSHBP01225 129 aa14.96□□□□□ -0.01
SMC4-209ENST00000468653 CD5P06127 495 aa14.96□□□□□ -0.01
SMC4-209ENST00000468653 LINC00869P0C866 280 aa14.96□□□□□ -0.01
SMC4-209ENST00000468653 UNQ5815/PRO19632Q6UWF5 114 aa14.96□□□□□ -0.01
SMC4-209ENST00000468653 TMEM116Q8NCL8 245 aa14.96□□□□□ -0.01
SMC4-209ENST00000468653 TMUB1Q9BVT8 246 aa14.96□□□□□ -0.01
SMC4-209ENST00000468653 TMEM218A2RU14 115 aa14.96□□□□□ -0.02
SMC4-209ENST00000468653 SEC14L6B5MCN3 397 aa14.96□□□□□ -0.02
SMC4-209ENST00000468653 GATA2P23769 480 aaPredicted RBP14.96□□□□□ -0.02
SMC4-209ENST00000468653 ECSCRQ19T08 205 aa14.96□□□□□ -0.02
SMC4-209ENST00000468653 TCRBV4S1A1TA0A5B7 111 aa14.95□□□□□ -0.02
SMC4-209ENST00000468653 M0QZK8 103 aa14.95□□□□□ -0.02
SMC4-209ENST00000468653 HAGHQ16775 308 aa14.95□□□□□ -0.02
SMC4-209ENST00000468653 TNFRSF19Q9NS68 423 aa14.95□□□□□ -0.02
SMC4-209ENST00000468653 GNG13Q9P2W3 67 aa14.95□□□□□ -0.02
SMC4-209ENST00000468653 NBPF19A0A087WUL8 3843 aa14.95□□□□□ -0.02
SMC4-209ENST00000468653 UNC79Q9P2D8 2635 aa14.94□□□□□ -0.02
SMC4-209ENST00000468653 IGKV1D-37A0A075B6S9 117 aa14.94□□□□□ -0.02
SMC4-209ENST00000468653 RBFOX3A6NFN3 312 aa14.94□□□□□ -0.02
SMC4-209ENST00000468653 K7EIM0 57 aa14.94□□□□□ -0.02
SMC4-209ENST00000468653 AMY1AP04745 511 aa14.94□□□□□ -0.02
SMC4-209ENST00000468653 C9orf152Q5JTZ5 239 aa14.94□□□□□ -0.02
SMC4-209ENST00000468653 FANCD2OSQ96PS1 177 aa14.94□□□□□ -0.02
SMC4-209ENST00000468653 SCRT1Q9BWW7 348 aa14.94□□□□□ -0.02
SMC4-209ENST00000468653 CCDC168Q8NDH2 2452 aa14.94□□□□□ -0.02
SMC4-209ENST00000468653 IGLV11-55A0A075B6I3 123 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 LINC01548A6NM66 108 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 SELENOTP62341 195 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 RHOBP62745 196 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 ZNF90Q03938 601 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 C16orf82Q7Z2V1 217 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 FAM110DQ8TAY7 271 aaPredicted RBP14.93□□□□□ -0.02
SMC4-209ENST00000468653 TMEM68Q96MH6 324 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 TRGV9Q99603 122 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 RARRES2Q99969 163 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 THYN1Q9P016 225 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 FASNP49327 2511 aaKnown RBP14.93□□□□□ -0.02
SMC4-209ENST00000468653 C9orf139Q6ZV77 190 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 IQCF2Q8IXL9 164 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 OR4X1Q8NH49 305 aa14.93□□□□□ -0.02
SMC4-209ENST00000468653 SVEP1Q4LDE5 3571 aa14.92□□□□□ -0.02
SMC4-209ENST00000468653 C9JQL5 133 aa14.91□□□□□ -0.02
SMC4-209ENST00000468653 IFNA1P01562 189 aa14.91□□□□□ -0.02
SMC4-209ENST00000468653 IGHV4-59P01825 116 aa14.91□□□□□ -0.02
SMC4-209ENST00000468653 SFTA3P0C7M3 94 aa14.91□□□□□ -0.02
SMC4-209ENST00000468653 PPT1P50897 306 aa14.91□□□□□ -0.02
SMC4-209ENST00000468653 AKIRIN2Q53H80 203 aa14.91□□□□□ -0.02
SMC4-209ENST00000468653 C19orf24Q9BVV8 132 aa14.91□□□□□ -0.02
SMC4-209ENST00000468653 PDZD2O15018 2839 aa14.91□□□□□ -0.02
SMC4-209ENST00000468653 ZANQ9Y493 2812 aa14.91□□□□□ -0.02
SMC4-209ENST00000468653 F8W036 122 aa14.9□□□□□ -0.02
SMC4-209ENST00000468653 G3V318 75 aa14.9□□□□□ -0.02
SMC4-209ENST00000468653 OR2J3O76001 311 aa14.9□□□□□ -0.02
SMC4-209ENST00000468653 HIST1H1BP16401 226 aaKnown RBP14.9□□□□□ -0.02
SMC4-209ENST00000468653 IER3P46695 156 aa14.9□□□□□ -0.02
SMC4-209ENST00000468653 FAM78BQ5VT40 261 aa14.9□□□□□ -0.02
SMC4-209ENST00000468653 TMPRSS5Q9H3S3 457 aa14.9□□□□□ -0.02
SMC4-209ENST00000468653 SMDT1Q9H4I9 107 aa14.9□□□□□ -0.02
SMC4-209ENST00000468653 GSX1Q9H4S2 264 aaPredicted RBP14.9□□□□□ -0.02
SMC4-209ENST00000468653 SEPSECSQ9HD40 501 aaKnown RBP14.9□□□□□ -0.02
SMC4-209ENST00000468653 ZNF355PQ9NSJ1 428 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms