RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 C4orf46Q504U0 113 aa14.29□□□□□ -0.12
COL7A1-207ENST00000467985 TMEM128Q5BJH2 165 aa14.29□□□□□ -0.12
COL7A1-207ENST00000467985 C20orf24Q9BUV8 137 aa14.29□□□□□ -0.12
COL7A1-207ENST00000467985 INS-IGF2F8WCM5 200 aa14.28□□□□□ -0.12
COL7A1-207ENST00000467985 TSPAN4O14817 238 aa14.28□□□□□ -0.12
COL7A1-207ENST00000467985 OR5AC1P0C628 307 aa14.28□□□□□ -0.12
COL7A1-207ENST00000467985 P0C879 139 aa14.28□□□□□ -0.12
COL7A1-207ENST00000467985 ANXA7P20073 488 aaKnown RBP14.28□□□□□ -0.12
COL7A1-207ENST00000467985 SNCAP37840 140 aa14.28□□□□□ -0.12
COL7A1-207ENST00000467985 UBE2MP61081 183 aaKnown RBP14.28□□□□□ -0.12
COL7A1-207ENST00000467985 SLC35G3Q8N808 338 aa14.28□□□□□ -0.12
COL7A1-207ENST00000467985 RRNAD1Q96FB5 475 aaKnown RBP14.28□□□□□ -0.12
COL7A1-207ENST00000467985 PDCD10Q9BUL8 212 aa14.28□□□□□ -0.12
COL7A1-207ENST00000467985 STARD9Q9P2P6 4700 aa14.27□□□□□ -0.12
COL7A1-207ENST00000467985 A0A0B4J293 547 aa14.27□□□□□ -0.13
COL7A1-207ENST00000467985 MT-CO2P00403 227 aa14.27□□□□□ -0.13
COL7A1-207ENST00000467985 IFNA17P01571 189 aa14.27□□□□□ -0.13
COL7A1-207ENST00000467985 UCP1P25874 307 aa14.27□□□□□ -0.13
COL7A1-207ENST00000467985 DHODHQ02127 395 aa14.27□□□□□ -0.13
COL7A1-207ENST00000467985 SP6Q3SY56 376 aa14.27□□□□□ -0.13
COL7A1-207ENST00000467985 DUSP18Q8NEJ0 188 aa14.27□□□□□ -0.13
COL7A1-207ENST00000467985 RNASE11Q8TAA1 199 aaKnown RBP14.27□□□□□ -0.13
COL7A1-207ENST00000467985 IL17DQ8TAD2 202 aa14.27□□□□□ -0.13
COL7A1-207ENST00000467985 TMEM230Q96A57 120 aa14.27□□□□□ -0.13
COL7A1-207ENST00000467985 SUB1P53999 127 aaKnown RBP eCLIP14.26□□□□□ -0.13
COL7A1-207ENST00000467985 PPP1R1AQ13522 171 aa14.26□□□□□ -0.13
COL7A1-207ENST00000467985 IZUMO4Q1ZYL8 232 aa14.26□□□□□ -0.13
COL7A1-207ENST00000467985 LYSTQ99698 3801 aa14.26□□□□□ -0.13
COL7A1-207ENST00000467985 GGTLC1Q9BX51 225 aa14.26□□□□□ -0.13
COL7A1-207ENST00000467985 RETNQ9HD89 108 aa14.26□□□□□ -0.13
COL7A1-207ENST00000467985 DYNC2H1Q8NCM8 4307 aaKnown RBP14.25□□□□□ -0.13
COL7A1-207ENST00000467985 LOC102724200A0A096LPH7 203 aaPredicted RBP14.25□□□□□ -0.13
COL7A1-207ENST00000467985 OR4C46A6NHA9 309 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 INMT-MINDY4F8WBC2 141 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 CORTO00230 105 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 ST8SIA3O43173 380 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 GNG7O60262 68 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 OR4E1P0C645 316 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 NPBWR1P48145 328 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 SRPXP78539 464 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 FAM219AQ8IW50 185 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 PINX1Q96BK5 328 aaKnown RBP14.25□□□□□ -0.13
COL7A1-207ENST00000467985 OR10C1Q96KK4 312 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 TMEM222Q9H0R3 208 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 ENY2Q9NPA8 101 aa14.25□□□□□ -0.13
COL7A1-207ENST00000467985 PIGBOS1A0A0B4J2F0 54 aa14.24□□□□□ -0.13
COL7A1-207ENST00000467985 YIF1AO95070 293 aa14.24□□□□□ -0.13
COL7A1-207ENST00000467985 SFT2D2O95562 160 aa14.24□□□□□ -0.13
COL7A1-207ENST00000467985 CDS2O95674 445 aa14.24□□□□□ -0.13
COL7A1-207ENST00000467985 SPINK9Q5DT21 86 aa14.24□□□□□ -0.13
COL7A1-207ENST00000467985 ZFAND6Q6FIF0 208 aa14.24□□□□□ -0.13
COL7A1-207ENST00000467985 LYG2Q86SG7 212 aa14.24□□□□□ -0.13
COL7A1-207ENST00000467985 GALNT14Q96FL9 552 aa14.24□□□□□ -0.13
COL7A1-207ENST00000467985 GPN1Q9HCN4 374 aaPredicted RBP14.24□□□□□ -0.13
COL7A1-207ENST00000467985 SMPXQ9UHP9 88 aa14.24□□□□□ -0.13
COL7A1-207ENST00000467985 IGHV3OR16-8A0A075B7F1 116 aa14.23□□□□□ -0.13
COL7A1-207ENST00000467985 ZNF207O43670 478 aaKnown RBP14.23□□□□□ -0.13
COL7A1-207ENST00000467985 HOXA1P49639 335 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-207ENST00000467985 SUPT4H1P63272 117 aaKnown RBP14.23□□□□□ -0.13
COL7A1-207ENST00000467985 LGI3Q8N145 548 aa14.23□□□□□ -0.13
COL7A1-207ENST00000467985 TMEM116Q8NCL8 245 aa14.23□□□□□ -0.13
COL7A1-207ENST00000467985 COQ8AQ8NI60 647 aa14.23□□□□□ -0.13
COL7A1-207ENST00000467985 FAM110AQ9BQ89 295 aa14.23□□□□□ -0.13
COL7A1-207ENST00000467985 GINS3Q9BRX5 216 aa14.23□□□□□ -0.13
COL7A1-207ENST00000467985 IGHV7-4-1A0A0J9YVY3 117 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 C9orf170A2RU37 121 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 PRAF2O60831 178 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 IGHV3-48P01763 117 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 BMI1P35226 326 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 DHRS2Q13268 280 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 TMEM187Q14656 261 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 AARDQ4LEZ3 155 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 TMEM268Q5VZI3 342 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 PVRIGQ6DKI7 326 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 GLYATL2Q8WU03 294 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 RBPMSQ93062 196 aaKnown RBP14.22□□□□□ -0.13
COL7A1-207ENST00000467985 SEC22CQ9BRL7 303 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 RHPN1-AS1Q9BWJ2 59 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-207ENST00000467985 PRR13Q9NZ81 148 aa14.22□□□□□ -0.13
COL7A1-207ENST00000467985 TRAV14DV4A0A0A6YYC5 116 aa14.21□□□□□ -0.13
COL7A1-207ENST00000467985 CHEK1O14757 476 aa14.21□□□□□ -0.13
COL7A1-207ENST00000467985 CD5P06127 495 aa14.21□□□□□ -0.13
COL7A1-207ENST00000467985 APOC4P55056 127 aa14.21□□□□□ -0.13
COL7A1-207ENST00000467985 SPCS3P61009 180 aa14.21□□□□□ -0.13
COL7A1-207ENST00000467985 MARVELD1Q9BSK0 173 aa14.21□□□□□ -0.13
COL7A1-207ENST00000467985 CACFD1Q9UGQ2 172 aa14.21□□□□□ -0.13
COL7A1-207ENST00000467985 A0A0G2JRQ6 117 aa14.2□□□□□ -0.14
COL7A1-207ENST00000467985 SCGB2A1O75556 95 aa14.2□□□□□ -0.14
COL7A1-207ENST00000467985 RNASE2P10153 161 aaKnown RBP14.2□□□□□ -0.14
COL7A1-207ENST00000467985 CMC4P56277 68 aaPredicted RBP14.2□□□□□ -0.14
COL7A1-207ENST00000467985 OR52E5Q8NH55 327 aa14.2□□□□□ -0.14
COL7A1-207ENST00000467985 IL22RA2Q969J5 263 aa14.2□□□□□ -0.14
COL7A1-207ENST00000467985 ZNF414Q96IQ9 312 aa14.2□□□□□ -0.14
COL7A1-207ENST00000467985 RNF2Q99496 336 aa14.2□□□□□ -0.14
COL7A1-207ENST00000467985 UBE2CO00762 179 aa14.19□□□□□ -0.14
COL7A1-207ENST00000467985 IL5P05113 134 aa14.19□□□□□ -0.14
COL7A1-207ENST00000467985 ODF3L2Q3SX64 289 aa14.19□□□□□ -0.14
COL7A1-207ENST00000467985 ZNF600Q6ZNG1 722 aa14.19□□□□□ -0.14
COL7A1-207ENST00000467985 SELENOHQ8IZQ5 122 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms