RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 SEC14L6B5MCN3 397 aa14.86□□□□□ -0.03
CHRNA4-203ENST00000467563 CYB5BO43169 146 aa14.86□□□□□ -0.03
CHRNA4-203ENST00000467563 APOC3P02656 99 aa14.86□□□□□ -0.03
CHRNA4-203ENST00000467563 SFTA3P0C7M3 94 aa14.86□□□□□ -0.03
CHRNA4-203ENST00000467563 IGHV4-31P0DP07 118 aa14.86□□□□□ -0.03
CHRNA4-203ENST00000467563 GATA2P23769 480 aaPredicted RBP14.86□□□□□ -0.03
CHRNA4-203ENST00000467563 PEA15Q15121 130 aa14.86□□□□□ -0.03
CHRNA4-203ENST00000467563 CCDC28AQ8IWP9 274 aa14.86□□□□□ -0.03
CHRNA4-203ENST00000467563 CR1P17927 2039 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 IGHV3-21A0A0B4J1V1 117 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 HLA-DRB1P01911 266 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 CDC34P49427 236 aaPredicted RBP14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 RND2P52198 227 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 TMEM249Q2WGJ8 235 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 PRSS57Q6UWY2 283 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 HSPB9Q9BQS6 159 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 CREBBPQ92793 2442 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 CSPG4Q6UVK1 2322 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 CORTO00230 105 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 MT-CO2P00403 227 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 EGR2P11161 476 aaPredicted RBP14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 TMEM219Q86XT9 240 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 RASL11BQ9BPW5 248 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 GNG13Q9P2W3 67 aa14.85□□□□□ -0.03
CHRNA4-203ENST00000467563 IGKV1D-37A0A075B6S9 117 aa14.84□□□□□ -0.03
CHRNA4-203ENST00000467563 F8W036 122 aa14.84□□□□□ -0.03
CHRNA4-203ENST00000467563 SCO1O75880 301 aa14.84□□□□□ -0.03
CHRNA4-203ENST00000467563 PPT1P50897 306 aa14.84□□□□□ -0.03
CHRNA4-203ENST00000467563 C10orf91Q5T1B1 145 aa14.84□□□□□ -0.03
CHRNA4-203ENST00000467563 ETFRF1Q6IPR1 90 aa14.84□□□□□ -0.03
CHRNA4-203ENST00000467563 SSX3Q99909 188 aa14.84□□□□□ -0.03
CHRNA4-203ENST00000467563 TMPRSS5Q9H3S3 457 aa14.84□□□□□ -0.03
CHRNA4-203ENST00000467563 J3QLI3 93 aa14.83□□□□□ -0.03
CHRNA4-203ENST00000467563 THAP8Q8NA92 274 aa14.83□□□□□ -0.03
CHRNA4-203ENST00000467563 I3L2K1 104 aa14.83□□□□□ -0.04
CHRNA4-203ENST00000467563 ICAM4Q14773 271 aa14.83□□□□□ -0.04
CHRNA4-203ENST00000467563 RBM14Q96PK6 669 aaKnown RBP14.83□□□□□ -0.04
CHRNA4-203ENST00000467563 SEC11CQ9BY50 192 aa14.83□□□□□ -0.04
CHRNA4-203ENST00000467563 A0A1W2PPV4 95 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 SH2D7A6NKC9 451 aaPredicted RBP14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 ZFP92A6NM28 416 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 NPIPB5A8MRT5 1133 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 FBP1P09467 338 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 ZNF90Q03938 601 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 ZNF506Q5JVG8 444 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 CYP2G1PQ6ZSU1 146 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 C5orf56Q8N8D9 126 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 TMEM116Q8NCL8 245 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 SEPSECSQ9HD40 501 aaKnown RBP14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 CARHSP1Q9Y2V2 147 aaKnown RBP14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 PRRC2AP48634 2157 aaKnown RBP14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 UNC79Q9P2D8 2635 aa14.82□□□□□ -0.04
CHRNA4-203ENST00000467563 DEFA5Q01523 94 aa14.81□□□□□ -0.04
CHRNA4-203ENST00000467563 GUCA2BQ16661 112 aa14.81□□□□□ -0.04
CHRNA4-203ENST00000467563 TTC9CQ8N5M4 171 aa14.81□□□□□ -0.04
CHRNA4-203ENST00000467563 ZNF469Q96JG9 3925 aaPredicted RBP14.81□□□□□ -0.04
CHRNA4-203ENST00000467563 LOC102723971A0A1B0GUV8 181 aa14.81□□□□□ -0.04
CHRNA4-203ENST00000467563 SPATA31B1PQ5VZV4 182 aa14.81□□□□□ -0.04
CHRNA4-203ENST00000467563 RXFP4Q8TDU9 374 aa14.81□□□□□ -0.04
CHRNA4-203ENST00000467563 PDZD2O15018 2839 aa14.81□□□□□ -0.04
CHRNA4-203ENST00000467563 CCDC168Q8NDH2 2452 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 TCRBV4S1A1TA0A5B7 111 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 K7EIM0 57 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 BCL2P10415 239 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 ATRAIDQ6UW56 229 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 FANCD2OSQ96PS1 177 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 SLC35B3Q9H1N7 401 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 SMDT1Q9H4I9 107 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 MOB4Q9Y3A3 225 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 LINC01548A6NM66 108 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 H3BUX3 64 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 AMY1AP04745 511 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 PMS2P11Q13670 270 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 KHDC3LQ587J8 217 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 WFDC11Q8NEX6 87 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 OR1L6Q8NGR2 347 aa14.8□□□□□ -0.04
CHRNA4-203ENST00000467563 ITPR2Q14571 2701 aa14.79□□□□□ -0.04
CHRNA4-203ENST00000467563 ATP6V0E1O15342 81 aa14.79□□□□□ -0.04
CHRNA4-203ENST00000467563 OR5T1Q8NG75 326 aa14.79□□□□□ -0.04
CHRNA4-203ENST00000467563 SGMS2Q8NHU3 365 aa14.79□□□□□ -0.04
CHRNA4-203ENST00000467563 C22orf15Q8WYQ4 148 aa14.79□□□□□ -0.04
CHRNA4-203ENST00000467563 GSX1Q9H4S2 264 aaPredicted RBP14.79□□□□□ -0.04
CHRNA4-203ENST00000467563 TNFRSF19Q9NS68 423 aa14.79□□□□□ -0.04
CHRNA4-203ENST00000467563 ITPR3Q14573 2671 aa14.79□□□□□ -0.04
CHRNA4-203ENST00000467563 IGLV11-55A0A075B6I3 123 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 MDFIC2A0A1B0GVS7 189 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 HSPB1P04792 205 aaKnown RBP14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 SRP19P09132 144 aaKnown RBP14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 STAG3L2P0CL84 134 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 STAG3L3P0CL85 134 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 RHOBP62745 196 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 LY6EQ16553 131 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 IQCF2Q8IXL9 164 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 BCL6BQ8N143 479 aaPredicted RBP14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 GATAD1Q8WUU5 269 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 PSMB11A5LHX3 300 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 ARL14EPLP0DKL9 152 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 FAM78BQ5VT40 261 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 SLC35E3Q7Z769 313 aa14.78□□□□□ -0.04
CHRNA4-203ENST00000467563 TMEM37Q8WXS4 190 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms