RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, human

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSSC4-208	ENST00000467308	TSC22D2	O75157	780 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	CA2	P00918	260 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	RPL27A	P46776	148 aa	Known RBP	11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	P2RY1	P47900	373 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	PAX9	P55771	341 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	ATP5I	P56385	69 aa	Predicted RBP	11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	UNQ5815/PRO19632	Q6UWF5	114 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	OR11H4	Q8NGC9	324 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	IL17D	Q8TAD2	202 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	DTD1	Q8TEA8	209 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	MS4A10	Q96PG2	267 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	MAGT1	Q9H0U3	335 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	OR5AC2	Q9NZP5	309 aa		11.98	□□□□□ -0.49
TSSC4-208	ENST00000467308	CGB1	A6NKQ9	187 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	CEBPZOS	A8MTT3	80 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	SSSCA1	O60232	199 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	TMEM50A	O95807	157 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	TRGV3	P03979	118 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	TNXA	Q16473	311 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	ZNF546	Q86UE3	836 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	LFNG	Q8NES3	379 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	AQP10	Q96PS8	301 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	PLEKHA3	Q9HB20	300 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	LYRM2	Q9NU23	88 aa	Predicted RBP	11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308	TNFSF18	Q9UNG2	199 aa		11.97	□□□□□ -0.49
TSSC4-208	ENST00000467308		A0A1B0GW64	132 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308		L7N2F9	121 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	SCAF4	O95104	1147 aa	Known RBP	11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	VAMP2	P63027	116 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	KLF5	Q13887	457 aa	Predicted RBP	11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	ZNF345	Q14585	488 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	FXYD3	Q14802	87 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	BSX	Q3C1V8	233 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	OR9G4	Q8NGQ1	327 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	SRSF12	Q8WXF0	261 aa	Known RBP	11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	CLCC1	Q96S66	551 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	FAM103A1	Q9BTL3	118 aa	Known RBP	11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	HIPK2	Q9H2X6	1198 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308		U3KQ87	197 aa		11.96	□□□□□ -0.49
TSSC4-208	ENST00000467308	FXYD6-FXYD2	A0A087WZ82	144 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	IGLC7	A0M8Q6	106 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	TEX22	C9J3V5	150 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308		E7EUB6	86 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308		H3BUA1	57 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	NXPH3	O95157	252 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	CNIH1	O95406	144 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	MYOD1	P15172	320 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	HOXA1	P49639	335 aa	Predicted RBP	11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	RPP30	P78346	268 aa	Known RBP	11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	C10orf55	Q5SWW7	151 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	IL34	Q6ZMJ4	242 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	GTSCR1	Q86UQ5	136 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	OR2C3	Q8N628	320 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	TMEM68	Q96MH6	324 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	TUBA4B	Q9H853	241 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308	ENY2	Q9NPA8	101 aa		11.95	□□□□□ -0.5
TSSC4-208	ENST00000467308		A0A0G2JLM5	398 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	BOLA2-SMG1P6	H3BVE0	249 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	HTR2B	P41595	481 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	ERH	P84090	104 aa	Known RBP	11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	OR2F1	Q13607	317 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	PVRIG	Q6DKI7	326 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	ACOT7L	Q6ZUV0	252 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	ZNF114	Q8NC26	417 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	SLC25A31	Q9H0C2	315 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	HEYL	Q9NQ87	328 aa	Predicted RBP	11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	SIGLEC8	Q9NYZ4	499 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	PSENEN	Q9NZ42	101 aa		11.94	□□□□□ -0.5
TSSC4-208	ENST00000467308	RNF222	A6NCQ9	220 aa		11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	MSGN1	A6NI15	193 aa		11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	IAPP	P10997	89 aa		11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	RPL12	P30050	165 aa	Known RBP	11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	NUP62	P37198	522 aa	Predicted RBP	11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	WT1-AS	Q06250	92 aa		11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	BAX	Q07812	192 aa		11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	LCN12	Q6JVE5	192 aa		11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	TMEM14EP	Q6UXP3	125 aa		11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	TMEM252	Q8N6L7	170 aa		11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	HINT2	Q9BX68	163 aa		11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	STRAP	Q9Y3F4	350 aa	Known RBP	11.93	□□□□□ -0.5
TSSC4-208	ENST00000467308	PLEC	Q15149	4684 aa	Known RBP	11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308		A0A0D9SG52	128 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	C15orf62	A8K5M9	175 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	NPIPB5	A8MRT5	1133 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	ARPC5	O15511	151 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	BRI3	O95415	125 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	CAV2	P51636	162 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	KLK9	Q2XQG4	91 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	C2orf83	Q53S99	150 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	SPINK9	Q5DT21	86 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	C9orf62	Q8N4C0	152 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	KCNRG	Q8N5I3	272 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	SLC24A4	Q8NFF2	622 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	OR10W1	Q8NGF6	305 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	MFF	Q9GZY8	342 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	ZNF355P	Q9NSJ1	428 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	KLK9	Q9UKQ9	250 aa		11.92	□□□□□ -0.5
TSSC4-208	ENST00000467308	ALMS1	Q8TCU4	4167 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms