RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 TRAV34A0A0B4J273 112 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 NUPR1O60356 82 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 CNTFRP26992 372 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 KIAA1644Q3SXP7 199 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 BET1LQ9NYM9 111 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 FCN1O00602 326 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 TNXAQ16473 311 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 A0A087X0M5 115 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 A0A1B0GX30 115 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 GGTLC3B5MD39 225 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 BTF3P20290 206 aaKnown RBP13.24□□□□□ -0.29
SLX4-202ENST00000466154 GRNP28799 593 aaKnown RBP13.24□□□□□ -0.29
SLX4-202ENST00000466154 ZNF503Q96F45 646 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 TAS2R45P59539 299 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 TIGITQ495A1 244 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 C2orf83Q53S99 150 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 NCOR1P1Q9H4R4 102 aa13.24□□□□□ -0.29
SLX4-202ENST00000466154 FNDC4Q9H6D8 234 aaPredicted RBP13.24□□□□□ -0.29
SLX4-202ENST00000466154 ARHGAP32A7KAX9 2087 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 IGHV1-69-2A0A0G2JMI3 117 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 SNURFLB1AK76 121 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 DLL1O00548 723 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 LOXP28300 417 aaPredicted RBP13.23□□□□□ -0.29
SLX4-202ENST00000466154 LCN2P80188 198 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 MEF2CQ06413 473 aaPredicted RBP13.23□□□□□ -0.29
SLX4-202ENST00000466154 POU2AF1Q16633 256 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 MRPL54Q6P161 138 aaKnown RBP13.23□□□□□ -0.29
SLX4-202ENST00000466154 ASCL5Q7RTU5 278 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 C14orf144Q96I85 54 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 SSBP3Q9BWW4 388 aaPredicted RBP13.23□□□□□ -0.29
SLX4-202ENST00000466154 NDUFA4L2Q9NRX3 87 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 TMEM167BQ9NRX6 74 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 MRPL36Q9P0J6 103 aaKnown RBP13.23□□□□□ -0.29
SLX4-202ENST00000466154 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.23□□□□□ -0.29
SLX4-202ENST00000466154 A0A1W2PRD5 423 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 A0A1W2PRF3 423 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 A0A1W2PRM7 423 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 TOX4O94842 621 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 MMD2Q8IY49 270 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 GSX1Q9H4S2 264 aaPredicted RBP13.23□□□□□ -0.29
SLX4-202ENST00000466154 ZNF355PQ9NSJ1 428 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 WNK2Q9Y3S1 2297 aa13.23□□□□□ -0.29
SLX4-202ENST00000466154 C8orf88P0DMB2 117 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 TBR1Q16650 682 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 OR1B1Q8NGR6 318 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 MRPL18Q9H0U6 180 aaKnown RBP13.22□□□□□ -0.29
SLX4-202ENST00000466154 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 WASHC3Q9Y3C0 194 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 SPTAN1Q13813 2472 aaKnown RBP13.22□□□□□ -0.29
SLX4-202ENST00000466154 USF1P22415 310 aaPredicted RBP13.22□□□□□ -0.29
SLX4-202ENST00000466154 RPL15P61313 204 aaKnown RBP13.22□□□□□ -0.29
SLX4-202ENST00000466154 RANP62826 216 aaKnown RBP13.22□□□□□ -0.29
SLX4-202ENST00000466154 PLGLAQ15195 96 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 RPEL1Q2QD12 228 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 BAGE3Q86Y29 109 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 BAGE2Q86Y30 109 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 OR5AN1Q8NGI8 311 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 TXNDC17Q9BRA2 123 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 ZNF705FA8MVS1 300 aaPredicted RBP13.22□□□□□ -0.29
SLX4-202ENST00000466154 TCAPO15273 167 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 ZNF705DP0CH99 300 aaPredicted RBP13.22□□□□□ -0.29
SLX4-202ENST00000466154 ZNF705BP0CI00 300 aaPredicted RBP13.22□□□□□ -0.29
SLX4-202ENST00000466154 CD99P14209 185 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 LEMD1Q68G75 181 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 FAM103A1Q9BTL3 118 aaKnown RBP13.22□□□□□ -0.29
SLX4-202ENST00000466154 DNAJC4Q9NNZ3 241 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 NGBQ9NPG2 151 aa13.22□□□□□ -0.29
SLX4-202ENST00000466154 DDTP30046 118 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 PCP4P48539 62 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 FOXL1Q12952 345 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 JOSD1Q15040 202 aaPredicted RBP13.21□□□□□ -0.29
SLX4-202ENST00000466154 TMEM249Q2WGJ8 235 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 VMA21Q3ZAQ7 101 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 IL36BQ9NZH7 164 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 SHISA9B4DS77 424 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 C10orf113Q5VZT2 155 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 RUSC1-AS1Q66K80 236 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 SLC25A33Q9BSK2 321 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 NAT8BQ9UHF3 227 aa13.21□□□□□ -0.29
SLX4-202ENST00000466154 SPTBN4Q9H254 2564 aa13.21□□□□□ -0.3
SLX4-202ENST00000466154 TYMSP04818 313 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 IGHV1-8P0DP01 117 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 AREGP15514 252 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 GNG5P63218 68 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 A0A1W2PPI3 338 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 CD3EP07766 207 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 PKIAP61925 76 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 VSTM2AQ8TAG5 236 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 TMEM186Q96B77 213 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 LINC00574Q9H8X3 128 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 F2Z2F3 143 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 CD24P25063 80 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 SUB1P53999 127 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLX4-202ENST00000466154 RBPJQ06330 500 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 ZNF664Q8N3J9 261 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 MS4A10Q96PG2 267 aa13.2□□□□□ -0.3
SLX4-202ENST00000466154 A0A1W2PN81 502 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 CRISP2P16562 243 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 TMEM177Q53S58 311 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms