RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 WRBO00258 174 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 NPBWR1P48145 328 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 RPP30P78346 268 aaKnown RBP14.05□□□□□ -0.16
HOXA9-203ENST00000465941 MLANAQ16655 118 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 BEAN1Q3B7T3 259 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 FAM106AQ4KMX7 169 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 GSG1LQ6UXU4 331 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 IL34Q6ZMJ4 242 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 ELOVL1Q9BW60 279 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 ZC4H2Q9NQZ6 224 aa14.05□□□□□ -0.16
HOXA9-203ENST00000465941 C15orf62A8K5M9 175 aa14.04□□□□□ -0.16
HOXA9-203ENST00000465941 ADMP35318 185 aa14.04□□□□□ -0.16
HOXA9-203ENST00000465941 ETFRF1Q6IPR1 90 aa14.04□□□□□ -0.16
HOXA9-203ENST00000465941 REC114Q7Z4M0 266 aa14.04□□□□□ -0.16
HOXA9-203ENST00000465941 OR4X1Q8NH49 305 aa14.04□□□□□ -0.16
HOXA9-203ENST00000465941 SMIM8Q96KF7 97 aa14.04□□□□□ -0.16
HOXA9-203ENST00000465941 CHRDL1Q9BU40 450 aa14.04□□□□□ -0.16
HOXA9-203ENST00000465941 ZNF436Q9C0F3 470 aaPredicted RBP14.04□□□□□ -0.16
HOXA9-203ENST00000465941 PEMTQ9UBM1 199 aa14.04□□□□□ -0.16
HOXA9-203ENST00000465941 C7orf66A4D0T2 115 aa14.03□□□□□ -0.16
HOXA9-203ENST00000465941 NUPL2O15504 423 aaKnown RBP14.03□□□□□ -0.16
HOXA9-203ENST00000465941 GNG7O60262 68 aa14.03□□□□□ -0.16
HOXA9-203ENST00000465941 MBPP02686 304 aaPredicted RBP14.03□□□□□ -0.16
HOXA9-203ENST00000465941 IFNA4P05014 189 aa14.03□□□□□ -0.16
HOXA9-203ENST00000465941 SLC25A4P12235 298 aa14.03□□□□□ -0.16
HOXA9-203ENST00000465941 RAB11AP62491 216 aa14.03□□□□□ -0.16
HOXA9-203ENST00000465941 EGFEM1PQ0D2K5 195 aa14.03□□□□□ -0.16
HOXA9-203ENST00000465941 OR4C12Q96R67 309 aa14.03□□□□□ -0.16
HOXA9-203ENST00000465941 RAB40CQ96S21 281 aa14.03□□□□□ -0.16
HOXA9-203ENST00000465941 SIGLEC8Q9NYZ4 499 aa14.03□□□□□ -0.16
HOXA9-203ENST00000465941 CMYA5Q8N3K9 4069 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 SAP30O75446 220 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 TMEM50AO95807 157 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 CSN3P07498 182 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 GPX4P36969 197 aaPredicted RBP14.02□□□□□ -0.17
HOXA9-203ENST00000465941 TAS2R30P59541 319 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 CD69Q07108 199 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 IL15RAQ13261 267 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 RGS21Q2M5E4 152 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 PRSS54Q6PEW0 395 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 TMEM116Q8NCL8 245 aa14.02□□□□□ -0.17
HOXA9-203ENST00000465941 MRPL36Q9P0J6 103 aaKnown RBP14.02□□□□□ -0.17
HOXA9-203ENST00000465941 IGHV3-35A0A0C4DH35 117 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 ZNF320A2RRD8 509 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 NDUFA4O00483 81 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 SSSCA1O60232 199 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 CLN5O75503 358 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 SCGB1D2O95969 90 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 PAX9P55771 341 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 RELQ04864 619 aaPredicted RBP14.01□□□□□ -0.17
HOXA9-203ENST00000465941 SPANXN5Q5MJ07 72 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 CACNG8Q8WXS5 425 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 PSENENQ9NZ42 101 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 ZMAT5Q9UDW3 170 aaKnown RBP14.01□□□□□ -0.17
HOXA9-203ENST00000465941 RCL1Q9Y2P8 373 aaKnown RBP14.01□□□□□ -0.17
HOXA9-203ENST00000465941 STRAPQ9Y3F4 350 aaKnown RBP14.01□□□□□ -0.17
HOXA9-203ENST00000465941 NBEAL1Q6ZS30 2694 aa14.01□□□□□ -0.17
HOXA9-203ENST00000465941 TRAV30A0A087WSZ9 112 aa14□□□□□ -0.17
HOXA9-203ENST00000465941 A8MWP6 167 aa14□□□□□ -0.17
HOXA9-203ENST00000465941 GOSR2O14653 212 aa14□□□□□ -0.17
HOXA9-203ENST00000465941 SSNA1O43805 119 aa14□□□□□ -0.17
HOXA9-203ENST00000465941 UNQ9165/PRO28630Q6UXU0 137 aa14□□□□□ -0.17
HOXA9-203ENST00000465941 ZNF414Q96IQ9 312 aa14□□□□□ -0.17
HOXA9-203ENST00000465941 C2orf70A6NJV1 201 aa13.99□□□□□ -0.17
HOXA9-203ENST00000465941 K7EPK0 472 aa13.99□□□□□ -0.17
HOXA9-203ENST00000465941 ELLP55199 621 aaPredicted RBP13.99□□□□□ -0.17
HOXA9-203ENST00000465941 KRTAP10-11P60412 298 aa13.99□□□□□ -0.17
HOXA9-203ENST00000465941 OXA1LQ15070 435 aa13.99□□□□□ -0.17
HOXA9-203ENST00000465941 SLC16A13Q7RTY0 426 aa13.99□□□□□ -0.17
HOXA9-203ENST00000465941 TMEM190Q8WZ59 177 aa13.99□□□□□ -0.17
HOXA9-203ENST00000465941 PAIP2BQ9ULR5 123 aaKnown RBP13.99□□□□□ -0.17
HOXA9-203ENST00000465941 UFC1Q9Y3C8 167 aa13.99□□□□□ -0.17
HOXA9-203ENST00000465941 ALG5Q9Y673 324 aa13.99□□□□□ -0.17
HOXA9-203ENST00000465941 PRSS46E5RG02 174 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 H3BP45 60 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 TSC22D2O75157 780 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 SCGB2A1O75556 95 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 SIX6O95475 246 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 CBLN1P23435 193 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 RND2P52198 227 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 ADAMTSL5Q6ZMM2 481 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 NPIPB3Q92617 1050 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 NMES1Q9C002 83 aa13.98□□□□□ -0.17
HOXA9-203ENST00000465941 TMEM213A2RRL7 107 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 K7EMT4 169 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 IGKV1-17P01599 117 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 IGLV1-51P01701 117 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 IGLC1P0CG04 106 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 FOLR2P14207 255 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 CYCSP99999 105 aaKnown RBP13.97□□□□□ -0.17
HOXA9-203ENST00000465941 RAB32Q13637 225 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 GAMTQ14353 236 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 TM4SF20Q53R12 229 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 TMEM14EPQ6UXP3 125 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 ZNF600Q6ZNG1 722 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 MARC2Q969Z3 335 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 C11orf1Q9H5F2 150 aa13.97□□□□□ -0.17
HOXA9-203ENST00000465941 LSM5Q9Y4Y9 91 aaKnown RBP13.97□□□□□ -0.17
HOXA9-203ENST00000465941 NOTCH3Q9UM47 2321 aa13.96□□□□□ -0.17
HOXA9-203ENST00000465941 PMS2P5A8MQ11 134 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms