RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 ACY3Q96HD9 319 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 RNF114Q9Y508 228 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 TMEM89A2RUT3 159 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 CORTO00230 105 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 CYB5BO43169 146 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 HIST1H1BP16401 226 aaKnown RBP13.4□□□□□ -0.26
PTPRU-206ENST00000465525 DLK1P80370 383 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 GAMTQ14353 236 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 C15orf32Q32M92 178 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 SCARB1Q8WTV0 552 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 ATP5SQ99766 215 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 ARPC5LQ9BPX5 153 aa13.4□□□□□ -0.26
PTPRU-206ENST00000465525 KANTRA0A1W2PQU2 76 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 BCL2L11O43521 198 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 RPLP1P05386 114 aaKnown RBP13.39□□□□□ -0.27
PTPRU-206ENST00000465525 PSMB8P28062 276 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 RND2P52198 227 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 RIPPLY3P57055 190 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 AKR1C1Q04828 323 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 EXOSC2Q13868 293 aaKnown RBP13.39□□□□□ -0.27
PTPRU-206ENST00000465525 OPCMLQ14982 345 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 RPL7L1Q6DKI1 246 aaKnown RBP13.39□□□□□ -0.27
PTPRU-206ENST00000465525 ACSM6Q6P461 480 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 UBAC2Q8NBM4 344 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 NECAP1Q8NC96 275 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 OR5AU1Q8NGC0 362 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 TMEM147Q9BVK8 224 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 THYN1Q9P016 225 aa13.39□□□□□ -0.27
PTPRU-206ENST00000465525 IGHV3-11P01762 117 aa13.38□□□□□ -0.27
PTPRU-206ENST00000465525 RAB9AP51151 201 aa13.38□□□□□ -0.27
PTPRU-206ENST00000465525 TEX38Q6PEX7 206 aa13.38□□□□□ -0.27
PTPRU-206ENST00000465525 C11orf44Q8N8P7 122 aa13.38□□□□□ -0.27
PTPRU-206ENST00000465525 NPIPB3Q92617 1050 aa13.38□□□□□ -0.27
PTPRU-206ENST00000465525 SLC35E1Q96K37 410 aa13.38□□□□□ -0.27
PTPRU-206ENST00000465525 C19orf24Q9BVV8 132 aa13.38□□□□□ -0.27
PTPRU-206ENST00000465525 CYTL1Q9NRR1 136 aa13.38□□□□□ -0.27
PTPRU-206ENST00000465525 UQCC1Q9NVA1 299 aa13.38□□□□□ -0.27
PTPRU-206ENST00000465525 FBN1P35555 2871 aaKnown RBP13.37□□□□□ -0.27
PTPRU-206ENST00000465525 RPS10-NUDT3A0A1W2PQS6 291 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 H3BUA1 57 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 GPX4P36969 197 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-206ENST00000465525 PROK1P58294 105 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 ATP5G2Q06055 141 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 KLK9Q2XQG4 91 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 KLK9Q9UKQ9 250 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 FOXE3Q13461 319 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 ATP6V1FQ16864 119 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 TCTEX1D4Q5JR98 221 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 ETFRF1Q6IPR1 90 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 CACNG8Q8WXS5 425 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 OR5B12Q96R08 314 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 ZNF471Q9BX82 626 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-206ENST00000465525 RFNGQ9Y644 331 aa13.37□□□□□ -0.27
PTPRU-206ENST00000465525 FAM223BA6NKX1 122 aa13.36□□□□□ -0.27
PTPRU-206ENST00000465525 SCAF4O95104 1147 aaKnown RBP13.36□□□□□ -0.27
PTPRU-206ENST00000465525 VWC2Q2TAL6 325 aa13.36□□□□□ -0.27
PTPRU-206ENST00000465525 TREML4Q6UXN2 200 aa13.36□□□□□ -0.27
PTPRU-206ENST00000465525 FAM223AQ8IWN6 122 aa13.36□□□□□ -0.27
PTPRU-206ENST00000465525 C21orf62Q9NYP8 219 aa13.36□□□□□ -0.27
PTPRU-206ENST00000465525 IGKV1OR2-108A0A075B7D4 117 aa13.35□□□□□ -0.27
PTPRU-206ENST00000465525 DFFBO76075 338 aa13.35□□□□□ -0.27
PTPRU-206ENST00000465525 FGF7P21781 194 aa13.35□□□□□ -0.27
PTPRU-206ENST00000465525 RUNX1Q01196 453 aa13.35□□□□□ -0.27
PTPRU-206ENST00000465525 Q56UQ5 140 aa13.35□□□□□ -0.27
PTPRU-206ENST00000465525 COMMD1Q8N668 190 aa13.35□□□□□ -0.27
PTPRU-206ENST00000465525 HSD17B11Q8NBQ5 300 aa13.35□□□□□ -0.27
PTPRU-206ENST00000465525 CCDC140Q96MF4 163 aa13.35□□□□□ -0.27
PTPRU-206ENST00000465525 GGACTQ9BVM4 153 aa13.35□□□□□ -0.27
PTPRU-206ENST00000465525 F8W735 103 aaPredicted RBP13.34□□□□□ -0.27
PTPRU-206ENST00000465525 TAAR5O14804 337 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 BRI3O95415 125 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 IFNA5P01569 189 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 ELANEP08246 267 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 CD28P10747 220 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 S100A1P23297 94 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 MFAP4P55083 255 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 KIAA0141Q14154 515 aaPredicted RBP13.34□□□□□ -0.27
PTPRU-206ENST00000465525 AWAT1Q58HT5 328 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 KHDC1LQ5JSQ8 128 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 BTNL8Q6UX41 500 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 CLEC19AQ6UXS0 136 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 ZNF502Q8TBZ5 544 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 VN1R17PQ8TDU5 208 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 WIPF2Q8TF74 440 aaPredicted RBP13.34□□□□□ -0.27
PTPRU-206ENST00000465525 EEF1AKMT3Q96AZ1 226 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 NPVFQ9HCQ7 196 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 WDR83OSQ9Y284 106 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 BORCS7-ASMTA0A0B4J1R7 106 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 ANKRD34BA5PLL1 514 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 OR2T8A6NH00 312 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 GPR183P32249 361 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 C18orf65Q6ZTR6 163 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 CXorf58Q96LI9 332 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 WDR61Q9GZS3 305 aaKnown RBP13.34□□□□□ -0.27
PTPRU-206ENST00000465525 GNB4Q9HAV0 340 aa13.34□□□□□ -0.27
PTPRU-206ENST00000465525 ZFP92A6NM28 416 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 GNG7O60262 68 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 TRBV12-3P01733 135 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 ZNF266Q14584 549 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 TMEM144Q7Z5S9 345 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms