RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 NDUFB6O95139 128 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 SFT2D2O95562 160 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 C8orf88P0DMB2 117 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 ADMP35318 185 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 NPBWR1P48145 328 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 COL7A1Q02388 2944 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 RELQ04864 619 aaPredicted RBP9.86□□□□□ -0.83
COL28A1-206ENST00000465339 CNPY1Q3B7I2 92 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 BSXQ3C1V8 233 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 CD300EQ496F6 205 aaPredicted RBP9.86□□□□□ -0.83
COL28A1-206ENST00000465339 UNQ9165/PRO28630Q6UXU0 137 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 GTSCR1Q86UQ5 136 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 Q8N1Y9 231 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 LRTM2Q8N967 370 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 UXS1Q8NBZ7 420 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 CHRDL1Q9BU40 450 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 HIPK2Q9H2X6 1198 aa9.86□□□□□ -0.83
COL28A1-206ENST00000465339 LINC00854A0A1B0GVQ3 168 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 IZUMO1RA6ND01 250 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 ZNF785A8K8V0 405 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 K7EMT4 169 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 GNG7O60262 68 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 TNFRSF9Q07011 255 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 PPP1R1AQ13522 171 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 NOXA1Q86UR1 476 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 TMEM190Q8WZ59 177 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 DAZ1Q9NQZ3 744 aaKnown RBP9.85□□□□□ -0.83
COL28A1-206ENST00000465339 HSPB7Q9UBY9 170 aa9.85□□□□□ -0.83
COL28A1-206ENST00000465339 A8MZ25 164 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 IGHV3-48P01763 117 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 SLC25A6P12236 298 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 EDN2P20800 178 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 ANKRD55Q3KP44 614 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 C2orf83Q53S99 150 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 OR1S1Q8NH92 325 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 RNASEH2CQ8TDP1 164 aaKnown RBP9.84□□□□□ -0.83
COL28A1-206ENST00000465339 CACNG8Q8WXS5 425 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 C20orf24Q9BUV8 137 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 CCDC32Q9BV29 185 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 TMED3Q9Y3Q3 217 aa9.84□□□□□ -0.83
COL28A1-206ENST00000465339 TRAV25A0A0B4J276 109 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 RPS10-NUDT3A0A1W2PQS6 291 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 C15orf62A8K5M9 175 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 SCGB2A1O75556 95 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 TMEM50AO95807 157 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 OPRK1P41145 380 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 ATP5IP56385 69 aaPredicted RBP9.83□□□□□ -0.84
COL28A1-206ENST00000465339 GUCA2BQ16661 112 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 SLC24A4Q8NFF2 622 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 S100ZQ8WXG8 99 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 MLXQ9UH92 298 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 U3KQ87 197 aa9.83□□□□□ -0.84
COL28A1-206ENST00000465339 TRAV30A0A087WSZ9 112 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 C9orf170A2RU37 121 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 FAM90A26D6RGX4 464 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 PLA2G10O15496 165 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 PITX3O75364 302 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 NXPH3O95157 252 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 FRMD6-AS1P0C7T7 363 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 IGHV4-30-4P0DP06 118 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 BTCP35070 178 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 ETFRF1Q6IPR1 90 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 RBPMS2Q6ZRY4 209 aaKnown RBP9.82□□□□□ -0.84
COL28A1-206ENST00000465339 TMEM61Q8N0U2 210 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 OR4X1Q8NH49 305 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 DTD1Q8TEA8 209 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 WDR89Q96FK6 387 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-206ENST00000465339 OR10C1Q96KK4 312 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 CLUHP3Q96NS8 147 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 RBKSQ9H477 322 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 FNDC4Q9H6D8 234 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-206ENST00000465339 FLVCR2Q9UPI3 526 aa9.82□□□□□ -0.84
COL28A1-206ENST00000465339 LYRM1O43325 122 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 CLN5O75503 358 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 MED6O75586 246 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 YIF1AO95070 293 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 IFNA10P01566 189 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 OR4E1P0C645 316 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 SLC25A4P12235 298 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 NPY1RP25929 384 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 MLANAQ16655 118 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 LAMTOR1Q6IAA8 161 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 BTNL8Q6UX41 500 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 ZNF600Q6ZNG1 722 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 COQ8AQ8NI60 647 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 ASCL2Q99929 193 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 NEURL2Q9BR09 285 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 BATF3Q9NR55 127 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 SMPXQ9UHP9 88 aa9.81□□□□□ -0.84
COL28A1-206ENST00000465339 TRAV14DV4A0A0A6YYC5 116 aa9.8□□□□□ -0.84
COL28A1-206ENST00000465339 HOXB5P09067 269 aa9.8□□□□□ -0.84
COL28A1-206ENST00000465339 CD81P60033 236 aa9.8□□□□□ -0.84
COL28A1-206ENST00000465339 DHRS2Q13268 280 aa9.8□□□□□ -0.84
COL28A1-206ENST00000465339 C4orf46Q504U0 113 aa9.8□□□□□ -0.84
COL28A1-206ENST00000465339 SLC16A13Q7RTY0 426 aa9.8□□□□□ -0.84
COL28A1-206ENST00000465339 LYG2Q86SG7 212 aa9.8□□□□□ -0.84
COL28A1-206ENST00000465339 SBSPONQ8IVN8 264 aa9.8□□□□□ -0.84
COL28A1-206ENST00000465339 TMEM116Q8NCL8 245 aa9.8□□□□□ -0.84
COL28A1-206ENST00000465339 ZNF414Q96IQ9 312 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms