RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 PINX1Q96BK5 328 aaKnown RBP13.48□□□□□ -0.25
CPSF4-209ENST00000465132 SLC25A31Q9H0C2 315 aa13.48□□□□□ -0.25
CPSF4-209ENST00000465132 RCL1Q9Y2P8 373 aaKnown RBP13.48□□□□□ -0.25
CPSF4-209ENST00000465132 DEDDO75618 318 aa13.47□□□□□ -0.25
CPSF4-209ENST00000465132 NDUFB8O95169 186 aa13.47□□□□□ -0.25
CPSF4-209ENST00000465132 ZP3P21754 424 aa13.47□□□□□ -0.25
CPSF4-209ENST00000465132 CD69Q07108 199 aa13.47□□□□□ -0.25
CPSF4-209ENST00000465132 ZNF343Q6P1L6 599 aa13.47□□□□□ -0.25
CPSF4-209ENST00000465132 STX12Q86Y82 276 aa13.47□□□□□ -0.25
CPSF4-209ENST00000465132 B9D2Q9BPU9 175 aa13.47□□□□□ -0.25
CPSF4-209ENST00000465132 C21orf62Q9NYP8 219 aa13.47□□□□□ -0.25
CPSF4-209ENST00000465132 PEF1Q9UBV8 284 aaKnown RBP13.47□□□□□ -0.25
CPSF4-209ENST00000465132 DNAH9Q9NYC9 4486 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 RYR3Q15413 4870 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 TRAV30A0A087WSZ9 112 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 MT-CO2P00403 227 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 HSPB1P04792 205 aaKnown RBP13.46□□□□□ -0.25
CPSF4-209ENST00000465132 CXCL3P19876 107 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 FCGR2BP31994 310 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-209ENST00000465132 NUP62P37198 522 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-209ENST00000465132 CAV2P51636 162 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 HBG1P69891 147 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 HBG2P69892 147 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 SPSB3Q6PJ21 355 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 OR11H7Q8NGC8 314 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 OR10P1Q8NGE3 313 aa13.46□□□□□ -0.25
CPSF4-209ENST00000465132 MCRIP2Q9BUT9 160 aaKnown RBP13.46□□□□□ -0.25
CPSF4-209ENST00000465132 COL7A1Q02388 2944 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.45□□□□□ -0.26
CPSF4-209ENST00000465132 MPC2O95563 127 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 MYCNOSP40205 109 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 P2RY1P47900 373 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 KIAA0141Q14154 515 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-209ENST00000465132 LRRC37A5PQ49AS3 106 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 PRSS54Q6PEW0 395 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 LCNL1Q6ZST4 164 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 C18orf65Q6ZTR6 163 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 C8orf86Q6ZUL3 223 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 SCARB1Q8WTV0 552 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 BSCL2Q96G97 398 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-209ENST00000465132 SLC35E1Q96K37 410 aa13.45□□□□□ -0.26
CPSF4-209ENST00000465132 LYRM2Q9NU23 88 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-209ENST00000465132 I3L2K1 104 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 I3L521 148 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 GNG7O60262 68 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 IGHV3-11P01762 117 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 FABP1P07148 127 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 MFAP2P55001 183 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 ZNF616Q08AN1 781 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 Q56UQ5 140 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 ACSM6Q6P461 480 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 OR1N2Q8NGR9 330 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 ZNF502Q8TBZ5 544 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 WWC2-AS2Q96NR7 200 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 GGACTQ9BVM4 153 aa13.44□□□□□ -0.26
CPSF4-209ENST00000465132 C15orf62A8K5M9 175 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 LINC01619G3V211 115 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 H3BP45 60 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 K7EIM0 57 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 NUPL2O15504 423 aaKnown RBP13.43□□□□□ -0.26
CPSF4-209ENST00000465132 ARL3P36405 182 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 SULT1A1P50225 295 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 BAXQ07812 192 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 TMEM14EPQ6UXP3 125 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 C19orf35Q6ZS72 473 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 OR4X1Q8NH49 305 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 GNB4Q9HAV0 340 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 DMRT1Q9Y5R6 373 aa13.43□□□□□ -0.26
CPSF4-209ENST00000465132 FNDC10F2Z333 226 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 CCL24O00175 119 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 GGCTO75223 188 aaKnown RBP13.42□□□□□ -0.26
CPSF4-209ENST00000465132 CLEC3BP05452 202 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 S100A11P31949 105 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 PAX9P55771 341 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 RELQ04864 619 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-209ENST00000465132 ATP6V1FQ16864 119 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 RPEL1Q2QD12 228 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 SLC16A13Q7RTY0 426 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 TMEM116Q8NCL8 245 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 OR11H1Q8NG94 326 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 OR2T35Q8NGX2 323 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 OR5B12Q96R08 314 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 OR4C12Q96R67 309 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 ZC4H2Q9NQZ6 224 aa13.42□□□□□ -0.26
CPSF4-209ENST00000465132 ANKRD34BA5PLL1 514 aa13.41□□□□□ -0.26
CPSF4-209ENST00000465132 MFSD2BA6NFX1 497 aa13.41□□□□□ -0.26
CPSF4-209ENST00000465132 DLK1P80370 383 aa13.41□□□□□ -0.26
CPSF4-209ENST00000465132 FAM106AQ4KMX7 169 aa13.41□□□□□ -0.26
CPSF4-209ENST00000465132 OR8G2PQ6IF36 304 aa13.41□□□□□ -0.26
CPSF4-209ENST00000465132 CLEC19AQ6UXS0 136 aa13.41□□□□□ -0.26
CPSF4-209ENST00000465132 UBAC2Q8NBM4 344 aa13.41□□□□□ -0.26
CPSF4-209ENST00000465132 CHAC2Q8WUX2 184 aa13.41□□□□□ -0.26
CPSF4-209ENST00000465132 ZMAT5Q9UDW3 170 aaKnown RBP13.41□□□□□ -0.26
CPSF4-209ENST00000465132 TENM3Q9P273 2699 aa13.41□□□□□ -0.26
CPSF4-209ENST00000465132 CLN5O75503 358 aa13.4□□□□□ -0.26
CPSF4-209ENST00000465132 TMEM50AO95807 157 aa13.4□□□□□ -0.26
CPSF4-209ENST00000465132 METTL15P1P0C7V9 234 aa13.4□□□□□ -0.26
CPSF4-209ENST00000465132 LILRB2Q8N423 598 aa13.4□□□□□ -0.26
CPSF4-209ENST00000465132 INO80EQ8NBZ0 244 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-209ENST00000465132 RAX2Q96IS3 184 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms