RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 IGHV3-66A0A0C4DH42 116 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 RBMY1BA6NDE4 496 aaKnown RBP9.14□□□□□ -0.95
XRN1-204ENST00000465074 RBMY1EA6NEQ0 496 aaKnown RBP9.14□□□□□ -0.95
XRN1-204ENST00000465074 CORTO00230 105 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 RBMY1DP0C7P1 496 aaKnown RBP9.14□□□□□ -0.95
XRN1-204ENST00000465074 TRIQKQ629K1 86 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 TMEM116Q8NCL8 245 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 FAM110AQ9BQ89 295 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 RHPN1-AS1Q9BWJ2 59 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 HIPK2Q9H2X6 1198 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 SMPXQ9UHP9 88 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 TMEM56-RWDD3S4R434 201 aa9.14□□□□□ -0.95
XRN1-204ENST00000465074 TRAV14DV4A0A0A6YYC5 116 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 IGHV7-4-1A0A0J9YVY3 117 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 C15orf62A8K5M9 175 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 K7EMT4 169 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 ZNF701M0R085 212 aaPredicted RBP9.13□□□□□ -0.95
XRN1-204ENST00000465074 TMEM50AO95807 157 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 HTR2BP41595 481 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 RPL11P62913 178 aaKnown RBP9.13□□□□□ -0.95
XRN1-204ENST00000465074 SUPT4H1P63272 117 aaKnown RBP9.13□□□□□ -0.95
XRN1-204ENST00000465074 LGI3Q8N145 548 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 GBGT1Q8N5D6 347 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 OR1S1Q8NH92 325 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 GALNT14Q96FL9 552 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 GINS3Q9BRX5 216 aa9.13□□□□□ -0.95
XRN1-204ENST00000465074 PUS1Q9Y606 427 aaKnown RBP eCLIP9.13□□□□□ -0.95
XRN1-204ENST00000465074 STAB2Q8WWQ8 2551 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 INS-IGF2F8WCM5 200 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 IFNA10P01566 189 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 FCGR2BP31994 310 aaPredicted RBP9.12□□□□□ -0.95
XRN1-204ENST00000465074 CCR6P51684 374 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 SRPXP78539 464 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 SMCO1Q147U7 214 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 TOMM20LQ6UXN7 152 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 WFDC3Q8IUB2 231 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 OR52E5Q8NH55 327 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 IL22RA2Q969J5 263 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 RNF2Q99496 336 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 RBKSQ9H477 322 aa9.12□□□□□ -0.95
XRN1-204ENST00000465074 FNDC4Q9H6D8 234 aaPredicted RBP9.12□□□□□ -0.95
XRN1-204ENST00000465074 MRPL36Q9P0J6 103 aaKnown RBP9.12□□□□□ -0.95
XRN1-204ENST00000465074 A0A0B4J2A0 478 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 RPS10-NUDT3A0A1W2PQS6 291 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 OR4C46A6NHA9 309 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 CHEK1O14757 476 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 TSPAN4O14817 238 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 SCGB2A1O75556 95 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 BAK1Q16611 211 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 TIGITQ495A1 244 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 TMEM128Q5BJH2 165 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 ZNF600Q6ZNG1 722 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 SLC24A4Q8NFF2 622 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 MUC7Q8TAX7 377 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 ACY3Q96HD9 319 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 SPAG8Q99932 426 aaPredicted RBP9.11□□□□□ -0.95
XRN1-204ENST00000465074 SLC25A21Q9BQT8 299 aaPredicted RBP9.11□□□□□ -0.95
XRN1-204ENST00000465074 SRRQ9GZT4 340 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 SHPKQ9UHJ6 478 aa9.11□□□□□ -0.95
XRN1-204ENST00000465074 PAIP2BQ9ULR5 123 aaKnown RBP9.11□□□□□ -0.95
XRN1-204ENST00000465074 LOC102724200A0A096LPH7 203 aaPredicted RBP9.1□□□□□ -0.95
XRN1-204ENST00000465074 A0A1B0GU03 582 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 CLN5O75503 358 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 APOHP02749 345 aaPredicted RBP9.1□□□□□ -0.95
XRN1-204ENST00000465074 LYL1P12980 280 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 NPY1RP25929 384 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 RND2P52198 227 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 TNFRSF9Q07011 255 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 C2orf83Q53S99 150 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 NMSQ5H8A3 153 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 ZFAND6Q6FIF0 208 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 LINC00322Q6ZN03 302 aaPredicted RBP9.1□□□□□ -0.95
XRN1-204ENST00000465074 TCF24Q7RTU0 167 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 CENPSQ8N2Z9 138 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 DTD1Q8TEA8 209 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 ST8SIA2Q92186 375 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 ZNF414Q96IQ9 312 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 OR10C1Q96KK4 312 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 GGTLC1Q9BX51 225 aa9.1□□□□□ -0.95
XRN1-204ENST00000465074 C3orf84H3BNL1 204 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 DNASE2O00115 360 aaPredicted RBP9.09□□□□□ -0.95
XRN1-204ENST00000465074 IFNA4P05014 189 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 HOXB5P09067 269 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 IAPPP10997 89 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 RPL35AP18077 110 aaKnown RBP9.09□□□□□ -0.95
XRN1-204ENST00000465074 NPPCP23582 126 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 BMI1P35226 326 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 PPP1R1AQ13522 171 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 BSXQ3C1V8 233 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 AARDQ4LEZ3 155 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 PVRIGQ6DKI7 326 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 NOXA1Q86UR1 476 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 APRG1Q8IVJ8 170 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 OR4X1Q8NH49 305 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 RNASEH2CQ8TDP1 164 aaKnown RBP9.09□□□□□ -0.95
XRN1-204ENST00000465074 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 CACFD1Q9UGQ2 172 aa9.09□□□□□ -0.95
XRN1-204ENST00000465074 TRAV30A0A087WSZ9 112 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 PIGBOS1A0A0B4J2F0 54 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 CENPXA8MT69 81 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms