RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 ROS1P08922 2347 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 TRAV9-1A0A075B6T8 112 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 A0A0D9SG52 128 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 SMIM9A6NGZ8 99 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 FADS1O60427 444 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 OR5F1O95221 314 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 LYPLA2O95372 231 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 RPS17P08708 135 aaKnown RBP0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 ASAH2BP0C7U1 165 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 SPI1P17947 270 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 CEBPGP53567 150 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 ERVS71-1P61550 626 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 CCL7P80098 99 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 AESQ08117 197 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 LINC01554Q52M75 96 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 SPANXN5Q5MJ07 72 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 CLVS1Q8IUQ0 354 aaPredicted RBP0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 TRAPPC5Q8IUR0 188 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST3H2BBQ8N257 126 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 OR52R1Q8NGF1 315 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 DCUN1D1Q96GG9 259 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 ODF3Q96PU9 254 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 SLC50A1Q9BRV3 221 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 TLNRD1Q9H1K6 362 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 TRABDQ9H4I3 376 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 OR5AC2Q9NZP5 309 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 SLC22A13Q9Y226 551 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 ERGIC3Q9Y282 383 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 C22orf24Q9Y442 160 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 MICAL3Q7RTP6 2002 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 SBF1O95248 1867 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 KIF13BQ9NQT8 1826 aa0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 PCDH15Q96QU1 1955 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 TRAV1-1A0A0B4J248 108 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 IGKV1-9A0A0C4DH69 117 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 hADV38S2A0JD32 116 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 PIRO00625 290 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 GEMIN2O14893 280 aaKnown RBP0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 OR1I1O60431 355 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 OR2B3O76000 313 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 RPP14O95059 124 aaKnown RBP0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 CRYZL1O95825 349 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 TCL1BO95988 128 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 RBP1P09455 135 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 BAALC-AS2P0C853 105 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 CYBAP13498 195 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 CDKN2CP42773 168 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 HIST1H3AP68431 136 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 H3F3AP84243 136 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 PRB3Q04118 309 aaPredicted RBP0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 EDDM3AQ14507 147 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 RHEBQ15382 184 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 TMEM97Q5BJF2 176 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 BPIFA4PQ86YQ2 179 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 OR6V1Q8N148 313 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 LINC00311Q8N616 119 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 GDPD1Q8N9F7 314 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 WFDC11Q8NEX6 87 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 OR52L1Q8NGH7 329 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 OR5A1Q8NGJ0 315 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 CT55Q8WUE5 264 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 BORCS7Q96B45 105 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 ADAT3Q96EY9 351 aaPredicted RBP0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 SERPINI1Q99574 410 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 TMEM133Q9H2Q1 129 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 SLC39A9Q9NUM3 307 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 TAS2R4Q9NYW5 299 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 POLEQ07864 2286 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 PCF11O94913 1555 aaKnown RBP0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 ZNF469Q96JG9 3925 aaPredicted RBP0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 TENM3Q9P273 2699 aa0.4□□□□□ -2.35
NUCKS1-202ENST00000464938 DOCK5Q9H7D0 1870 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 MYOFQ9NZM1 2061 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 A0A087WX48 190 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 TRAV14DV4A0A0A6YYC5 116 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 TRAV12-1A0A0B4J245 112 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 M0R2N4 97 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 LYZL6O75951 148 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 CTXN2P0C2S0 81 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 BRS3P32247 399 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 RNASE4P34096 147 aaKnown RBP0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 SSR2P43308 183 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 DEFA1P59665 94 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 YPEL3P61236 119 aaPredicted RBP0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 SRSF6Q13247 344 aaKnown RBP0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 ITGB3BPQ13352 177 aaPredicted RBP0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 DEFB115Q30KQ5 88 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 KHDC3LQ587J8 217 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 LCA10Q71F78 164 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 OOSP2Q86WS3 158 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 PHF13Q86YI8 300 aaPredicted RBP0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 OR4E2Q8NGC2 313 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 OR13D1Q8NGV5 346 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 OR10J5Q8NHC4 309 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 ZNF418Q8TF45 676 aaPredicted RBP0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 C2orf50Q96LR7 162 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 CMSS1Q9BQ75 279 aaKnown RBP0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 ULBP3Q9BZM4 244 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 RNASE7Q9H1E1 156 aaKnown RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms