RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 A0A096LPI6 279 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 TRAV41A0A0B4J266 112 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 A0A1B0GV90 55 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 TRDV1A0A1B0GX56 115 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 IRGMA1A4Y4 181 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 FAM92AA1XBS5 289 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 FABP5P3A8MUU1 101 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 A8MWP6 167 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 C9JAW5 83 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 OVOL1O14753 267 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 TAX1BP3O14907 124 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 DPM2O94777 84 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 OR2H2O95918 312 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 TRGC2P03986 189 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 UCHL1P09936 223 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 CRYBB3P26998 211 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 TAS2R30P59541 319 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 RPL18Q07020 188 aaKnown RBP2.62□□□□□ -1.99
PTCD3-205ENST00000464541 C3orf22Q8N5N4 141 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 TSTD1Q8NFU3 115 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 TEX37Q96LM6 180 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 AP1S3Q96PC3 154 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 GPX7Q96SL4 187 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-205ENST00000464541 LXNQ9BS40 222 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 DERL1Q9BUN8 251 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 ZNF471Q9BX82 626 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-205ENST00000464541 LINC00574Q9H8X3 128 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 HIGD1AQ9Y241 93 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 LINC00588Q9Y4M8 146 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 RBM7Q9Y580 266 aaKnown RBP2.62□□□□□ -1.99
PTCD3-205ENST00000464541 ICOSQ9Y6W8 199 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 U3KQ87 197 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 SCN4AP35499 1836 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 DOCK3Q8IZD9 2030 aa2.62□□□□□ -1.99
PTCD3-205ENST00000464541 YLPM1P49750 1951 aaKnown RBP2.61□□□□□ -1.99
PTCD3-205ENST00000464541 TRIP11Q15643 1979 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 LTBP4Q8N2S1 1624 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 TSPOAP1O95153 1857 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 A0A1W2PNN7 141 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 CCDC160A6NGH7 325 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 C17orf51A8MQB3 221 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 C1orf196B1AJZ1 125 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 LINC00587B1AMM8 73 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 H3BMM0 161 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 C19orf84I3L1E1 186 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 K7ERU9 68 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 UBFD1O14562 309 aaKnown RBP2.61□□□□□ -1.99
PTCD3-205ENST00000464541 DLEU1O43261 78 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 ZNF73O43830 326 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-205ENST00000464541 TNFSF15O95150 251 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 CDS2O95674 445 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 IGKV1D-33P01593 117 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 IGKV1-33P01594 117 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 IGKV1-5P01602 117 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 TRGV3P03979 118 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 DNAJB13P59910 316 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 SELENOWP63302 87 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 LGALS9BQ3B8N2 356 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 C1orf140Q5VVS0 124 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 LGALS9CQ6DKI2 356 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 ZNF322Q6U7Q0 402 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-205ENST00000464541 PRR15Q8IV56 129 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 RPRMLQ8N4K4 120 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 PACRGLQ8N7B6 248 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 OR4C16Q8NGL9 310 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 OR5C1Q8NGR4 320 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 OR4K15Q8NH41 348 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 MAGOHBQ96A72 148 aaKnown RBP2.61□□□□□ -1.99
PTCD3-205ENST00000464541 UBE2WQ96B02 151 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 SLAMF6Q96DU3 332 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 TCEAL7Q9BRU2 100 aa2.61□□□□□ -1.99
PTCD3-205ENST00000464541 MYH3P11055 1940 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 MEIS3P1A6NDR6 274 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 GGT3PA6NGU5 568 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 A8MWP4 228 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 TXNDC9O14530 226 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 LYZL6O75951 148 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 CST7O76096 145 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 IGHV1-69P01742 117 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 CGB3P0DN86 165 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 CGB7P0DN87 165 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 CRHBPP24387 322 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 SRIP30626 198 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 ZNF80P51504 273 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-205ENST00000464541 RBM11P57052 281 aaKnown RBP2.6□□□□□ -1.99
PTCD3-205ENST00000464541 KLF3P57682 345 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-205ENST00000464541 HRCT1Q6UXD1 115 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 Q6ZQT7 251 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 IDO2Q6ZQW0 420 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 ZNF767PQ75MW2 155 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 SPATA12Q7Z6I5 190 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 OR8D4Q8NGM9 314 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 RNASE6Q93091 150 aaKnown RBP2.6□□□□□ -1.99
PTCD3-205ENST00000464541 SMIM3Q9BZL3 60 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 C11orf1Q9H5F2 150 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 KIF1BO60333 1816 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 CEP170Q5SW79 1584 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 DOCK5Q9H7D0 1870 aa2.6□□□□□ -1.99
PTCD3-205ENST00000464541 DICER1Q9UPY3 1922 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms