RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 NUTF2P61970 127 aaKnown RBP7.53□□□□□ -1.2
HPS4-208ENST00000464362 TEX38Q6PEX7 206 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 LINC01551Q86U37 167 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 SCNM1Q9BWG6 230 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 MED12LQ86YW9 2145 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 PPIAL4CA0A0B4J2A2 164 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 IGHV3-66A0A0C4DH42 116 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 MLNRO43193 412 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 PPIAL4GP0DN37 164 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 MC5RP33032 325 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 BPIFA4PQ86YQ2 179 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 CD177Q8N6Q3 437 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 TMEM116Q8NCL8 245 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 OR5R1Q8NH85 324 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 OTOGLQ3ZCN5 2332 aa7.53□□□□□ -1.2
HPS4-208ENST00000464362 IGHV3OR16-10A0A075B7F0 116 aa7.52□□□□□ -1.2
HPS4-208ENST00000464362 CDX4O14627 284 aaPredicted RBP7.52□□□□□ -1.2
HPS4-208ENST00000464362 TWIST1Q15672 202 aa7.52□□□□□ -1.2
HPS4-208ENST00000464362 Q6P435 159 aa7.52□□□□□ -1.2
HPS4-208ENST00000464362 TMEM14EPQ6UXP3 125 aa7.52□□□□□ -1.2
HPS4-208ENST00000464362 NRN1Q9NPD7 142 aa7.52□□□□□ -1.2
HPS4-208ENST00000464362 TLN2Q9Y4G6 2542 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 HIGD1CA8MV81 97 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 J3QW42 95 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 BSPH1Q075Z2 132 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 ZNF841Q6ZN19 808 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 ZNF788Q6ZQV5 615 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 KLK15Q9H2R5 256 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 F11RQ9Y624 299 aaKnown RBP7.52□□□□□ -1.21
HPS4-208ENST00000464362 LY6G6EA0A0G2JKS1 128 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 OR4C46A6NHA9 309 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 ZNF207O43670 478 aaKnown RBP7.52□□□□□ -1.21
HPS4-208ENST00000464362 SMIM17P0DL12 118 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 KIR2DL2P43627 348 aaPredicted RBP7.52□□□□□ -1.21
HPS4-208ENST00000464362 ASPHD1Q5U4P2 390 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 MBNL2Q5VZF2 373 aaKnown RBP7.52□□□□□ -1.21
HPS4-208ENST00000464362 CDPF1Q6NVV7 123 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 OR4A5Q8NH83 315 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 C18orf15Q96N68 181 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 PLA2G2EQ9NZK7 142 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 U3KQA8 63 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 F2RL2O00254 374 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 IGKV1D-33P01593 117 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 IGKV1-33P01594 117 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 IGKV1-39P01597 117 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 IGKV1D-39P04432 117 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 CKS2P33552 79 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 FAM90A1Q86YD7 464 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 TMEM106BQ9NUM4 274 aa7.52□□□□□ -1.21
HPS4-208ENST00000464362 MRPS18CQ9Y3D5 142 aaKnown RBP7.52□□□□□ -1.21
HPS4-208ENST00000464362 A0A1B0GV72 72 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 PEX7O00628 323 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 DLEU1O43261 78 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 GOSR1O95249 250 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 BTF3P20290 206 aaKnown RBP7.51□□□□□ -1.21
HPS4-208ENST00000464362 PMCHL1Q16048 86 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 TMEM144Q7Z5S9 345 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 LINC00479Q96M42 142 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 AGMATQ9BSE5 352 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 ABCA2Q9BZC7 2435 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 TMEM189A5PLL7 270 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 C15orf61A6NNL5 157 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 MGPP08493 103 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 CD59P13987 128 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 IL15RAQ13261 267 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 TM4SF20Q53R12 229 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 LCN12Q6JVE5 192 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 SMIM12Q96EX1 92 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 CHD7Q9P2D1 2997 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 IGHV1-69-2A0A0G2JMI3 117 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 YPEL1O60688 119 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 OR52E5Q8NH55 327 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 NUDT11Q96G61 164 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 YPEL2Q96QA6 119 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 HSPB8Q9UJY1 196 aa7.51□□□□□ -1.21
HPS4-208ENST00000464362 C15orf62A8K5M9 175 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 TBR1Q16650 682 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 SPANXN1Q5VSR9 72 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 ASCL4Q6XD76 172 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 FOXL2NBQ6ZUU3 175 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 ABHD17AQ96GS6 310 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 MGST2Q99735 147 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 RABAC1Q9UI14 185 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 FOXA2Q9Y261 457 aaPredicted RBP7.5□□□□□ -1.21
HPS4-208ENST00000464362 ETV2O00321 342 aaPredicted RBP7.5□□□□□ -1.21
HPS4-208ENST00000464362 DLX1P56177 255 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 ZNF726P1Q15940 193 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 ASCL5Q7RTU5 278 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 ASCL2Q99929 193 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 C2orf88Q9BSF0 95 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 SLC25A33Q9BSK2 321 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 BPTFQ12830 3046 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 TRAV1-1A0A0B4J248 108 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 SRRM5B3KS81 715 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 GZMBP10144 247 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 PLA2G5P39877 138 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 ZNF664Q8N3J9 261 aa7.5□□□□□ -1.21
HPS4-208ENST00000464362 OSR1Q8TAX0 266 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms