RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PAXXQ9BUH6 204 aa5.88□□□□□ -1.47
CLSTN1-204ENST00000464286 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
CLSTN1-204ENST00000464286 CSTL1Q9H114 145 aa5.88□□□□□ -1.47
CLSTN1-204ENST00000464286 IFI27L2Q9H2X8 130 aa5.88□□□□□ -1.47
CLSTN1-204ENST00000464286 RPP21Q9H633 154 aaKnown RBP5.88□□□□□ -1.47
CLSTN1-204ENST00000464286 CLCF1Q9UBD9 225 aa5.88□□□□□ -1.47
CLSTN1-204ENST00000464286 LOXL2Q9Y4K0 774 aa5.88□□□□□ -1.47
CLSTN1-204ENST00000464286 U3KQA8 63 aa5.88□□□□□ -1.47
CLSTN1-204ENST00000464286 ASXL3Q9C0F0 2248 aa5.88□□□□□ -1.47
CLSTN1-204ENST00000464286 A0A1B0GXF2 115 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 GAGE10A6NGK3 116 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 GGTLC3B5MD39 225 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 J3QR89 54 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 UPK2O00526 184 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 TAX1BP3O14907 124 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 SPINK4O60575 86 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 ACTL6BO94805 426 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 NUDT3O95989 172 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 P01737 135 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 APOA2P02652 100 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 SSTR5P35346 364 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 SLAQ13239 276 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 RIGQ13278 110 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 LDLRAD2Q5SZI1 272 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 SPATA31B1PQ5VZV4 182 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 WDR82Q6UXN9 313 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 RBPMS2Q6ZRY4 209 aaKnown RBP5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 FAM19A2Q8N3H0 131 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 FAM169BQ8N8A8 192 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 OR4X2Q8NGF9 303 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 OR9G4Q8NGQ1 327 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 KLF14Q8TD94 323 aaPredicted RBP5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 GPR82Q96P67 336 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 TTTY12Q9BZ98 90 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 FAM234AQ9H0X4 552 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 ZNF430Q9H8G1 570 aaPredicted RBP5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 IDI2-AS1Q9NZ38 188 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 ARHGAP21Q5T5U3 1957 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 ESPL1Q14674 2120 aa5.87□□□□□ -1.47
CLSTN1-204ENST00000464286 GTF3C1Q12789 2109 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 HCFC1P51610 2035 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 TRBV6-1A0A0K0K1D8 114 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 TEX50A0A1B0GTY4 177 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 GAGE12BA1L429 117 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 HIGD1CA8MV81 97 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 H3BRM9 83 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 K7EQM0 130 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 CORTO00230 105 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 FOXH1O75593 365 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 IGLV2-8P01709 118 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 COX8AP10176 69 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 DEFA4P12838 97 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 HTR1DP28221 377 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 APOBEC3AP31941 199 aaPredicted RBP5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 CEACAM8P31997 349 aaPredicted RBP5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 EDDM3AQ14507 147 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 KIR3DS1Q14943 382 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 MBNL2Q5VZF2 373 aaKnown RBP5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 EBLN2Q6P2I7 272 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 ZNF329Q86UD4 541 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 TMEM251Q8N6I4 163 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 RBMXL3Q8N7X1 1067 aaKnown RBP5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 C5orf17Q8NAS9 161 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 OR2Z1Q8NG97 314 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 OR10X1Q8NGY0 326 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 OR10AG1Q8NH19 301 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 LRRC29Q8WV35 223 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 H1FXQ92522 213 aaKnown RBP5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 SNRNP40Q96DI7 357 aaKnown RBP5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 NUDT11Q96G61 164 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 FER1L6-AS2Q96M78 137 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 HINT2Q9BX68 163 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 SCRT2Q9NQ03 307 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 ZNF355PQ9NSJ1 428 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 CALYQ9NYX4 217 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 KLF12Q9Y4X4 402 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 USF3Q68DE3 2245 aa5.86□□□□□ -1.47
CLSTN1-204ENST00000464286 MYO9BQ13459 2157 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 IGHV3-43A0A0B4J1X8 118 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 KBTBD11-OT1A0A1B0GTJ5 212 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 TCRBV4S1A1TA0A5B7 111 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 PINLYPA6NC86 204 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 SRRM5B3KS81 715 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 CT45A6P0DMU7 189 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 CT45A5P0DMU8 189 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 CT45A7P0DMV0 189 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 IGHV3-43DP0DP04 118 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 CAMPP49913 170 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 HSD52Q0P140 79 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 MPV17L2Q567V2 206 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 TMEM97Q5BJF2 176 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 CT45A1Q5HYN5 189 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 LCN12Q6JVE5 192 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 Q6ZT83 130 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 FA2HQ7L5A8 372 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 C11orf53Q8IXP5 236 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 ATOH7Q8N100 152 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 TMEM178AQ8NBL3 297 aa5.85□□□□□ -1.47
CLSTN1-204ENST00000464286 CT45A3Q8NHU0 189 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms