RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PFDN5Q99471 154 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 GPR61Q9BZJ8 451 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 PRR20EP86478 221 aa17.43■□□□□ 0.38
PDLIM2-216ENST00000464275 PRR20CP86479 221 aa17.43■□□□□ 0.38
PDLIM2-216ENST00000464275 PRR20DP86480 221 aa17.43■□□□□ 0.38
PDLIM2-216ENST00000464275 PRR20BP86481 221 aa17.43■□□□□ 0.38
PDLIM2-216ENST00000464275 PRR20AP86496 221 aa17.43■□□□□ 0.38
PDLIM2-216ENST00000464275 TNXAQ16473 311 aa17.43■□□□□ 0.38
PDLIM2-216ENST00000464275 SLC35E1Q96K37 410 aa17.43■□□□□ 0.38
PDLIM2-216ENST00000464275 SLC45A2Q9UMX9 530 aa17.43■□□□□ 0.38
PDLIM2-216ENST00000464275 DCHS2Q6V1P9 2916 aa17.43■□□□□ 0.38
PDLIM2-216ENST00000464275 TIMM23O14925 209 aa17.42■□□□□ 0.38
PDLIM2-216ENST00000464275 VMO1Q7Z5L0 202 aa17.42■□□□□ 0.38
PDLIM2-216ENST00000464275 PPP1R27Q86WC6 154 aa17.42■□□□□ 0.38
PDLIM2-216ENST00000464275 OR2T10Q8NGZ9 312 aa17.42■□□□□ 0.38
PDLIM2-216ENST00000464275 LINC00869P0C866 280 aa17.41■□□□□ 0.38
PDLIM2-216ENST00000464275 HIST1H1BP16401 226 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-216ENST00000464275 COMPP49747 757 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-216ENST00000464275 RHOBP62745 196 aa17.41■□□□□ 0.38
PDLIM2-216ENST00000464275 MLANAQ16655 118 aa17.41■□□□□ 0.38
PDLIM2-216ENST00000464275 LURAP1LQ8IV03 231 aa17.41■□□□□ 0.38
PDLIM2-216ENST00000464275 NAV3Q8IVL0 2385 aa17.41■□□□□ 0.38
PDLIM2-216ENST00000464275 IGLC7A0M8Q6 106 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 MT-CO2P00403 227 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 PAX2Q02962 417 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 LINC01551Q86U37 167 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 IGFBPL1Q8WX77 278 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 CFHR4Q92496 578 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 HILPDAQ9Y5L2 63 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 ARL2-SNX15V9GYD0 113 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 ACACBO00763 2458 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 OR10J1P30954 320 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 PDLIM4P50479 330 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 ZNF114Q8NC26 417 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 BPESC1Q9GZL8 116 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 SIRPDQ9H106 197 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 FBXL15Q9H469 300 aa17.4■□□□□ 0.38
PDLIM2-216ENST00000464275 IGKV1OR2-108A0A075B7D4 117 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 IGHV2-70DA0A0C4DH43 119 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 NPPCP23582 126 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 LMO4P61968 165 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 GNB1P62873 340 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 CST9LP1Q5W188 147 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 LHFPL4Q7Z7J7 247 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 OOSP1A8MZH6 123 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 IGHV4-39P01824 125 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 HOXB4P17483 251 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 ACTL10Q5JWF8 245 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 GFI1BQ5VTD9 330 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 PVRIGQ6DKI7 326 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 OR1P1Q8NH06 330 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 PACRGQ96M98 296 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 HIST1H2BLQ99880 126 aa17.39■□□□□ 0.37
PDLIM2-216ENST00000464275 GATCO43716 136 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-216ENST00000464275 FABP4P15090 132 aa17.38■□□□□ 0.37
PDLIM2-216ENST00000464275 MINOS1Q5TGZ0 78 aa17.38■□□□□ 0.37
PDLIM2-216ENST00000464275 OR5R1Q8NH85 324 aa17.38■□□□□ 0.37
PDLIM2-216ENST00000464275 OR2T6Q8NHC8 308 aa17.38■□□□□ 0.37
PDLIM2-216ENST00000464275 MINOS1-NBL1R4GNA1 71 aa17.38■□□□□ 0.37
PDLIM2-216ENST00000464275 A0A1W2PPQ1 181 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 REG1AP05451 166 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 ARL14EPLP0DKL9 152 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 FOXL1Q12952 345 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 PLGLAQ15195 96 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 CCDC144NLQ6NUI1 221 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 NECAP1Q8NC96 275 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 FNDC4Q9H6D8 234 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 CACNA1BQ00975 2339 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 A0A1W2PRD5 423 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 A0A1W2PRF3 423 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 A0A1W2PRM7 423 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 MOSP00540 346 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 ETFRF1Q6IPR1 90 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 SPOCK3Q9BQ16 436 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 C19orf24Q9BVV8 132 aa17.37■□□□□ 0.37
PDLIM2-216ENST00000464275 IGSF10Q6WRI0 2623 aa17.36■□□□□ 0.37
PDLIM2-216ENST00000464275 NBR2O15453 112 aa17.36■□□□□ 0.37
PDLIM2-216ENST00000464275 ATP5G3P48201 142 aa17.36■□□□□ 0.37
PDLIM2-216ENST00000464275 NPBQ8NG41 125 aa17.36■□□□□ 0.37
PDLIM2-216ENST00000464275 CCL19Q99731 98 aa17.36■□□□□ 0.37
PDLIM2-216ENST00000464275 LY96Q9Y6Y9 160 aa17.36■□□□□ 0.37
PDLIM2-216ENST00000464275 TRAV9-1A0A075B6T8 112 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 TRAV20A0A0B4J274 112 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 NDUFB4O95168 129 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 LGALS4P56470 323 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 MMDQ15546 238 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 SSX2Q16385 188 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 SRSF8Q9BRL6 282 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 SEPSECSQ9HD40 501 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 WNK2Q9Y3S1 2297 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 TEX22C9J3V5 150 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 FOXH1O75593 365 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 NDUFA3O95167 84 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 AREGP15514 252 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 SPATA31B1PQ5VZV4 182 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 THAP8Q8NA92 274 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 SRSF12Q8WXF0 261 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 C11orf52Q96A22 123 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 ELOVL1Q9BW60 279 aa17.35■□□□□ 0.37
PDLIM2-216ENST00000464275 FUT9Q9Y231 359 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms