RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 TMEM106BQ9NUM4 274 aa3.84□□□□□ -1.79
VPS72-203ENST00000463470 ZMAT5Q9UDW3 170 aaKnown RBP3.84□□□□□ -1.79
VPS72-203ENST00000463470 WASHC3Q9Y3C0 194 aa3.84□□□□□ -1.79
VPS72-203ENST00000463470 AMMECR1Q9Y4X0 333 aaPredicted RBP3.84□□□□□ -1.79
VPS72-203ENST00000463470 POLEQ07864 2286 aa3.84□□□□□ -1.79
VPS72-203ENST00000463470 DOPEY2Q9Y3R5 2298 aa3.84□□□□□ -1.79
VPS72-203ENST00000463470 CHD3Q12873 2000 aaKnown RBP3.83□□□□□ -1.8
VPS72-203ENST00000463470 DOCK11Q5JSL3 2073 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 ADARB2-AS1A8MUL3 147 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 TMEM178BH3BS89 294 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 SCGB2A1O75556 95 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 ACTL6BO94805 426 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 HLA-DQA1P01909 254 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 REG1AP05451 166 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 SOD3P08294 240 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 RNASE2P10153 161 aaKnown RBP3.83□□□□□ -1.8
VPS72-203ENST00000463470 ESDP10768 282 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 RAB4AP20338 218 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 BMP5P22003 454 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 GNLYP22749 145 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 APOBEC3AP31941 199 aaPredicted RBP3.83□□□□□ -1.8
VPS72-203ENST00000463470 PPOXP50336 477 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 TPPP2P59282 170 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 UBE2G2P60604 165 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 ERVFC1-1P60608 527 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 RAB4BP61018 213 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 SSTP61278 116 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 RPS16P62249 146 aaKnown RBP3.83□□□□□ -1.8
VPS72-203ENST00000463470 Q0VG73 95 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 PSG5Q15238 335 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 ADIPOQQ15848 244 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 ANKRD39Q53RE8 183 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 PRR30Q53SZ7 412 aaPredicted RBP3.83□□□□□ -1.8
VPS72-203ENST00000463470 GFRALQ6UXV0 394 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 FAM231DQ6ZW35 169 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 DOLPP1Q86YN1 238 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 TGIF2LXQ8IUE1 241 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 ZNF114Q8NC26 417 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 OCC1Q8TAD7 63 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 SSMEM1Q8WWF3 244 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 RND1Q92730 232 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 VKORC1Q9BQB6 163 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 SLC25A33Q9BSK2 321 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 HINT2Q9BX68 163 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 ZNF430Q9H8G1 570 aaPredicted RBP3.83□□□□□ -1.8
VPS72-203ENST00000463470 PATZ1Q9HBE1 687 aaKnown RBP3.83□□□□□ -1.8
VPS72-203ENST00000463470 DYNLRB1Q9NP97 96 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 CDC42EP3Q9UKI2 254 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 ZNF835Q9Y2P0 537 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 HCFC1P51610 2035 aa3.83□□□□□ -1.8
VPS72-203ENST00000463470 HIVEP3Q5T1R4 2406 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 TRAV3A0A0B4J244 114 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 A0A0G2JNJ9 132 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 TCRBV4S1A1TA0A5B7 111 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 DPRXA6NFQ7 191 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 IFITM10A6NMD0 228 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 LINC00587B1AMM8 73 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 C22orf46C9J442 243 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 H0YJW9 148 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 TNFRSF13BO14836 293 aaPredicted RBP3.82□□□□□ -1.8
VPS72-203ENST00000463470 SLC31A2O15432 143 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 COX7A2P2O60397 106 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 OR7C2O60412 319 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 AVPP01185 164 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 AMBPP02760 352 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 CD3EP07766 207 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 LINC00869P0C866 280 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 SAA1P0DJI8 122 aaPredicted RBP3.82□□□□□ -1.8
VPS72-203ENST00000463470 HIST1H1EP10412 219 aaKnown RBP3.82□□□□□ -1.8
VPS72-203ENST00000463470 CRISP2P16562 243 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 IGFBP2P18065 325 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 DDTP30046 118 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 OR10J1P30954 320 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 CA7P43166 264 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 ATP5G3P48201 142 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 GNG10P50151 68 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 TDGF1P3P51864 188 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 RPL15P61313 204 aaKnown RBP3.82□□□□□ -1.8
VPS72-203ENST00000463470 FAM27E3Q08E93 113 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 GAMTQ14353 236 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 MSMPQ1L6U9 139 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 FBXL19-AS1Q494R0 122 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 TMEM155Q4W5P6 130 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 SPINK9Q5DT21 86 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 OR10J3Q5JRS4 329 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 C10orf113Q5VZT2 155 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 TMEM200BQ69YZ2 307 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 PVRIGQ6DKI7 326 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 HIST2H2BCQ6DN03 193 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 VKORC1L1Q8N0U8 176 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 GBGT1Q8N5D6 347 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 FAM216BQ8N7L0 139 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 THAP8Q8NA92 274 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 NECAP1Q8NC96 275 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 DEFB108BQ8NET1 73 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 TMEM37Q8WXS4 190 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 RNASE6Q93091 150 aaKnown RBP3.82□□□□□ -1.8
VPS72-203ENST00000463470 SNRNP40Q96DI7 357 aaKnown RBP3.82□□□□□ -1.8
VPS72-203ENST00000463470 PERPQ96FX8 193 aa3.82□□□□□ -1.8
VPS72-203ENST00000463470 TRGV9Q99603 122 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms