RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 FOXA2Q9Y261 457 aaPredicted RBP5.8□□□□□ -1.48
UBE4B-204ENST00000462658 IGHV4OR15-8A0A075B7B6 117 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 IGHV3OR16-10A0A075B7F0 116 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 IGHV1-69DA0A0B4J2H0 117 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 A0A1B0GUV1 79 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 IGSF23A1L1A6 192 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 A8MZ25 164 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 TAAR5O14804 337 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 BCL2L11O43521 198 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 ATP6V1G1O75348 118 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 VENTXO95231 258 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 TGFAP01135 160 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 IGHV1-69P01742 117 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 SNRNP70P08621 437 aaKnown RBP5.79□□□□□ -1.48
UBE4B-204ENST00000462658 IGHV4-31P0DP07 118 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 PAX6P26367 422 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 CNTFRP26992 372 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 SAA4P35542 130 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 ERVFC1-1P60608 527 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 HSPE1P61604 102 aaKnown RBP5.79□□□□□ -1.48
UBE4B-204ENST00000462658 PSG5Q15238 335 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 TMEM249Q2WGJ8 235 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 PDLIM3Q53GG5 364 aaPredicted RBP5.79□□□□□ -1.48
UBE4B-204ENST00000462658 SPINK9Q5DT21 86 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 SLC51BQ86UW2 128 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 DYNAPQ8N1N2 210 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 TMEM252Q8N6L7 170 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 OR8H1Q8NGG4 311 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 TMEM167AQ8TBQ9 72 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 CIB3Q96Q77 187 aaPredicted RBP5.79□□□□□ -1.48
UBE4B-204ENST00000462658 TSNAXQ99598 290 aaKnown RBP5.79□□□□□ -1.48
UBE4B-204ENST00000462658 SRSF8Q9BRL6 282 aaKnown RBP5.79□□□□□ -1.48
UBE4B-204ENST00000462658 TMEM14BQ9NUH8 114 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 FKBP11Q9NYL4 201 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 TCF19Q9Y242 345 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 OR51B2Q9Y5P1 312 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 WSB1Q9Y6I7 421 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 NF1P21359 2839 aa5.79□□□□□ -1.48
UBE4B-204ENST00000462658 TRAV40A0A0B4J280 105 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 TEX50A0A1B0GTY4 177 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 H3BP45 60 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 J3QLI3 93 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 MOSP00540 346 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 IGKV1D-33P01593 117 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 IGKV1-33P01594 117 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 CRYGBP07316 175 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 CD24P25063 80 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 BRS3P32247 399 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 RPL8P62917 257 aaKnown RBP5.78□□□□□ -1.48
UBE4B-204ENST00000462658 EWSR1Q01844 656 aaKnown RBP eCLIP5.78□□□□□ -1.48
UBE4B-204ENST00000462658 EBI3Q14213 229 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 HES1Q14469 280 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 SPANXN5Q5MJ07 72 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 TEX261Q6UWH6 196 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 WFDC11Q8NEX6 87 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 OR2T10Q8NGZ9 312 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 OR5B3Q8NH48 314 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 BSCL2Q96G97 398 aaPredicted RBP5.78□□□□□ -1.48
UBE4B-204ENST00000462658 CLCC1Q96S66 551 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 FOXC2Q99958 501 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 HINT2Q9BX68 163 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 ZNF471Q9BX82 626 aaPredicted RBP5.78□□□□□ -1.48
UBE4B-204ENST00000462658 COMMD5Q9GZQ3 224 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 ZNF430Q9H8G1 570 aaPredicted RBP5.78□□□□□ -1.48
UBE4B-204ENST00000462658 ENY2Q9NPA8 101 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 METTL1Q9UBP6 276 aaKnown RBP5.78□□□□□ -1.48
UBE4B-204ENST00000462658 FBXL17Q9UF56 701 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 ZNF257Q9Y2Q1 563 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 SIGLEC9Q9Y336 463 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 STRAPQ9Y3F4 350 aaKnown RBP5.78□□□□□ -1.48
UBE4B-204ENST00000462658 U3KQ87 197 aa5.78□□□□□ -1.48
UBE4B-204ENST00000462658 SETD2Q9BYW2 2564 aaPredicted RBP5.77□□□□□ -1.49
UBE4B-204ENST00000462658 NBR2O15453 112 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 CST7O76096 145 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 CFDP00746 253 aaPredicted RBP5.77□□□□□ -1.49
UBE4B-204ENST00000462658 OPN1MWP04001 364 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 METTL15P1P0C7V9 234 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 FAM106CPP0CH98 169 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 OPN1MW2P0DN77 364 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 OPN1MW3P0DN78 364 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 IGHV4-38-2P0DP08 117 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 VDAC2P45880 294 aaPredicted RBP5.77□□□□□ -1.49
UBE4B-204ENST00000462658 HOXA1P49639 335 aaPredicted RBP5.77□□□□□ -1.49
UBE4B-204ENST00000462658 SULT1A1P50225 295 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 DYNLT3P51808 116 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 UBA52P62987 128 aaKnown RBP5.77□□□□□ -1.49
UBE4B-204ENST00000462658 PRCDQ00LT1 54 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 BAXQ07812 192 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 TMEM267Q0VDI3 215 aaPredicted RBP5.77□□□□□ -1.49
UBE4B-204ENST00000462658 PJVKQ0ZLH3 352 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 PLGLAQ15195 96 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 MMDQ15546 238 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 PRSS8Q16651 343 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 MRGPRG-AS1Q2M3A8 158 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 KLF17Q5JT82 389 aaPredicted RBP5.77□□□□□ -1.49
UBE4B-204ENST00000462658 FAM120AOSQ5T036 256 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 CYB5R2Q6BCY4 276 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 BRD3OSQ6XYD6 125 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 STX12Q86Y82 276 aa5.77□□□□□ -1.49
UBE4B-204ENST00000462658 MMD2Q8IY49 270 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms