RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 VN1R17PQ8TDU5 208 aa11.13□□□□□ -0.63
GTF3C5-208ENST00000461871 TRGV9Q99603 122 aa11.13□□□□□ -0.63
GTF3C5-208ENST00000461871 MGST2Q99735 147 aa11.13□□□□□ -0.63
GTF3C5-208ENST00000461871 GGTLC1Q9BX51 225 aa11.13□□□□□ -0.63
GTF3C5-208ENST00000461871 FNDC4Q9H6D8 234 aaPredicted RBP11.13□□□□□ -0.63
GTF3C5-208ENST00000461871 RPRMQ9NS64 109 aa11.13□□□□□ -0.63
GTF3C5-208ENST00000461871 GAR1Q9NY12 217 aaKnown RBP11.13□□□□□ -0.63
GTF3C5-208ENST00000461871 PDZD2O15018 2839 aa11.13□□□□□ -0.63
GTF3C5-208ENST00000461871 IGLV11-55A0A075B6I3 123 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 SEC14L6B5MCN3 397 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 NDUFS6O75380 124 aaKnown RBP11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 FOSL1P15407 271 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 TAGLN2P37802 199 aaKnown RBP11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 NPBWR1P48145 328 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 MFAP2P55001 183 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 PRR20EP86478 221 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 PRR20CP86479 221 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 PRR20DP86480 221 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 PRR20BP86481 221 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 PRR20AP86496 221 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 FFAR4Q5NUL3 377 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 ASPHD1Q5U4P2 390 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 RNF2Q99496 336 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 ACTR3CQ9C0K3 210 aaPredicted RBP11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 CSPG4Q6UVK1 2322 aa11.12□□□□□ -0.63
GTF3C5-208ENST00000461871 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 MFSD2BA6NFX1 497 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 MT-CO2P00403 227 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 REG1AP05451 166 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 NDPQ00604 133 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 C19orf54Q5BKX5 351 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 COMMD7Q86VX2 200 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 OR10G4Q8NGN3 311 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 OR10G9Q8NGN4 311 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 OR10G7Q8NGN6 311 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 FAM213BQ8TBF2 198 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 NPIPB3Q92617 1050 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 MISP3Q96FF7 219 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 FANCD2OSQ96PS1 177 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 SLC39A9Q9NUM3 307 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 VPREB3Q9UKI3 123 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 PXMP4Q9Y6I8 212 aa11.11□□□□□ -0.63
GTF3C5-208ENST00000461871 TRBV9A0A0B4J1U6 114 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 CTXND1A0A1B0GTU2 59 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 TCRBV4S1A1TA0A5B7 111 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 TMEM89A2RUT3 159 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 AP4M1O00189 453 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 PPT1P50897 306 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 MFAP4P55083 255 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 B2MP61769 119 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 FAM209BQ5JX69 171 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 UNQ5815/PRO19632Q6UWF5 114 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 CYP2G1PQ6ZSU1 146 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 SLC35E3Q7Z769 313 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 S100A7AQ86SG5 101 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 BCL6BQ8N143 479 aaPredicted RBP11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 RPP25LQ8N5L8 163 aaKnown RBP11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 GATAD1Q8WUU5 269 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 CXorf58Q96LI9 332 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 HSPB9Q9BQS6 159 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 PBDC1Q9BVG4 233 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 TMUB1Q9BVT8 246 aa11.1□□□□□ -0.63
GTF3C5-208ENST00000461871 IGKV1OR2-108A0A075B7D4 117 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 ELOA3CA0A087WX78 387 aaPredicted RBP11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 K7EIM0 57 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 SMAD7O15105 426 aaKnown RBP11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 ATP6V0E1O15342 81 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 CLN5O75503 358 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 LINC00869P0C866 280 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 RND2P52198 227 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 PLP1P60201 277 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 KRTAP1-1Q07627 177 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 ZNF616Q08AN1 781 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 MLANAQ16655 118 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 ACSM6Q6P461 480 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 SPNS3Q6ZMD2 512 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 TMEM219Q86XT9 240 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 NECAP1Q8NC96 275 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 OR2T6Q8NHC8 308 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 SFT2D1Q8WV19 159 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 ACY3Q96HD9 319 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 PFDN5Q99471 154 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 HRH4Q9H3N8 390 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 DMRT1Q9Y5R6 373 aa11.09□□□□□ -0.63
GTF3C5-208ENST00000461871 TRAV41A0A0B4J266 112 aa11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 A0A1W2PPV4 95 aa11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 FAM223BA6NKX1 122 aa11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 ZFP92A6NM28 416 aa11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 IGHV4-59P01825 116 aa11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 OR10J1P30954 320 aa11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 SRP14P37108 136 aaKnown RBP11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 YPEL3P61236 119 aaPredicted RBP11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 RPL15P61313 204 aaKnown RBP11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 RHOBP62745 196 aa11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 FAM223AQ8IWN6 122 aa11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 STPG3Q8N7X2 389 aa11.08□□□□□ -0.64
GTF3C5-208ENST00000461871 OR1L4Q8NGR5 311 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms