RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 RPL11P62913 178 aaKnown RBP6.41□□□□□ -1.38
HDAC9-220ENST00000461409 RNASE10Q5GAN6 216 aaKnown RBP6.41□□□□□ -1.38
HDAC9-220ENST00000461409 MZT2AQ6P582 158 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 APRG1Q8IVJ8 170 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 SLC35G3Q8N808 338 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 DUSP18Q8NEJ0 188 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 GATAD1Q8WUU5 269 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 PDCD10Q9BUL8 212 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 FUNDC2Q9BWH2 189 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 KRTAP17-1Q9BYP8 105 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 CSTL1Q9H114 145 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 TMEM231Q9H6L2 316 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 X6R8D5 127 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 PLECQ15149 4684 aaKnown RBP6.41□□□□□ -1.38
HDAC9-220ENST00000461409 IGKV3-7A0A075B6H7 116 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 IGHV3-49A0A0A0MS15 119 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 FAM25AB3EWG3 89 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 FAM25CB3EWG5 89 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 FAM25GB3EWG6 89 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 INS-IGF2F8WCM5 200 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 M0QYG6 137 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 HPGDSO60760 199 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 DFFBO76075 338 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 IFNA17P01571 189 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 IGHV3-48P01763 117 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 ELK1P19419 428 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 TFPI2P48307 235 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 PIGPP57054 158 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 VBP1P61758 197 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 EWSR1Q01844 656 aaKnown RBP eCLIP6.4□□□□□ -1.38
HDAC9-220ENST00000461409 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 ZNF600Q6ZNG1 722 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 ARRDC1Q8N5I2 433 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 C15orf40Q8WUR7 153 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 MFFQ9GZY8 342 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 ENY2Q9NPA8 101 aa6.4□□□□□ -1.38
HDAC9-220ENST00000461409 TRAV2A0A0B4J234 112 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 DNASE2O00115 360 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-220ENST00000461409 ST8SIA3O43173 380 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 B3GALNT1O75752 331 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 IGKV1-5P01602 117 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 P0C879 139 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 TRIM16LQ309B1 348 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 TOMM20LQ6UXN7 152 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 TCF24Q7RTU0 167 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 GBGT1Q8N5D6 347 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 CCDC71LQ8N9Z2 235 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 RNASE11Q8TAA1 199 aaKnown RBP6.39□□□□□ -1.39
HDAC9-220ENST00000461409 ZFAND1Q8TCF1 268 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 PHLDA1Q8WV24 401 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-220ENST00000461409 RRNAD1Q96FB5 475 aaKnown RBP6.39□□□□□ -1.39
HDAC9-220ENST00000461409 ZNF414Q96IQ9 312 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 RARRES2Q99969 163 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 C11orf68Q9H3H3 251 aaKnown RBP6.39□□□□□ -1.39
HDAC9-220ENST00000461409 VSIRQ9H7M9 311 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 COPZ2Q9P299 210 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 KLK11Q9UBX7 282 aa6.39□□□□□ -1.39
HDAC9-220ENST00000461409 PUS1Q9Y606 427 aaKnown RBP eCLIP6.39□□□□□ -1.39
HDAC9-220ENST00000461409 IGHV3OR16-13A0A075B7E8 117 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 IGHV3-74A0A0B4J1X5 117 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 A0A0B4J293 547 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 C3orf85A0A1B0GTC6 90 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 A0A1W2PS18 150 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 CA1P00915 261 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-220ENST00000461409 CD3DP04234 171 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 NPPCP23582 126 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 HOXA1P49639 335 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-220ENST00000461409 PPP5CP53041 499 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 IZUMO4Q1ZYL8 232 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 SPINK9Q5DT21 86 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 PVRIGQ6DKI7 326 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 LHFPL1Q86WI0 220 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 OR11H2Q8NH07 326 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 OR52I2Q8NH67 350 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 TERB2Q8NHR7 220 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 ST8SIA2Q92186 375 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 NARS2Q96I59 477 aaKnown RBP6.38□□□□□ -1.39
HDAC9-220ENST00000461409 METTL26Q96S19 204 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 TP53RKQ96S44 253 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 MS4A6AQ9H2W1 248 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 MTFP1Q9UDX5 166 aa6.38□□□□□ -1.39
HDAC9-220ENST00000461409 RPS10-NUDT3A0A1W2PQS6 291 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 GABARAPO95166 117 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 TMEM50AO95807 157 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 IFNA4P05014 189 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 RNASE2P10153 161 aaKnown RBP6.37□□□□□ -1.39
HDAC9-220ENST00000461409 ZNF182P17025 639 aaPredicted RBP6.37□□□□□ -1.39
HDAC9-220ENST00000461409 UCP1P25874 307 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 OPRK1P41145 380 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 ETV6P41212 452 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 RPL5P46777 297 aaKnown RBP6.37□□□□□ -1.39
HDAC9-220ENST00000461409 EIF2B2P49770 351 aaKnown RBP6.37□□□□□ -1.39
HDAC9-220ENST00000461409 TAS2R19P59542 299 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 SPCS3P61009 180 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 TMEM187Q14656 261 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 RBMS2Q15434 407 aaKnown RBP6.37□□□□□ -1.39
HDAC9-220ENST00000461409 TMEM41BQ5BJD5 291 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 RNASE12Q5GAN4 147 aaKnown RBP6.37□□□□□ -1.39
HDAC9-220ENST00000461409 FAM219AQ8IW50 185 aa6.37□□□□□ -1.39
HDAC9-220ENST00000461409 STHQ8IWL8 128 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms