RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 ZNF414Q96IQ9 312 aa11.15□□□□□ -0.62
NCK1-202ENST00000460960 HEYLQ9NQ87 328 aaPredicted RBP11.15□□□□□ -0.62
NCK1-202ENST00000460960 PEF1Q9UBV8 284 aaKnown RBP11.15□□□□□ -0.62
NCK1-202ENST00000460960 PTTG1O95997 202 aa11.14□□□□□ -0.63
NCK1-202ENST00000460960 MT-CO2P00403 227 aa11.14□□□□□ -0.63
NCK1-202ENST00000460960 SNCAP37840 140 aa11.14□□□□□ -0.63
NCK1-202ENST00000460960 IAH1Q2TAA2 248 aaPredicted RBP11.14□□□□□ -0.63
NCK1-202ENST00000460960 Q8N1Y9 231 aa11.14□□□□□ -0.63
NCK1-202ENST00000460960 ZBTB8BQ8NAP8 495 aaPredicted RBP11.14□□□□□ -0.63
NCK1-202ENST00000460960 PINX1Q96BK5 328 aaKnown RBP11.14□□□□□ -0.63
NCK1-202ENST00000460960 WDR89Q96FK6 387 aaPredicted RBP11.14□□□□□ -0.63
NCK1-202ENST00000460960 FNDC4Q9H6D8 234 aaPredicted RBP11.14□□□□□ -0.63
NCK1-202ENST00000460960 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
NCK1-202ENST00000460960 ENY2Q9NPA8 101 aa11.14□□□□□ -0.63
NCK1-202ENST00000460960 C19orf73Q9NVV2 129 aa11.14□□□□□ -0.63
NCK1-202ENST00000460960 IGHV3-35A0A0C4DH35 117 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 FAM25EA8MYX2 175 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 SIX6O95475 246 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 TMEM50AO95807 157 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 IFNA21P01568 189 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 EDN2P20800 178 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 GPR183P32249 361 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 POLR2GP62487 172 aaKnown RBP eCLIP11.13□□□□□ -0.63
NCK1-202ENST00000460960 HAGHQ16775 308 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 SLC24A4Q8NFF2 622 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 EEF1AKMT3Q96AZ1 226 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 KRTAP17-1Q9BYP8 105 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 RANGRFQ9HD47 186 aaPredicted RBP11.13□□□□□ -0.63
NCK1-202ENST00000460960 GSKIPQ9P0R6 139 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 HYDINQ4G0P3 5121 aa11.13□□□□□ -0.63
NCK1-202ENST00000460960 PIGBOS1A0A0B4J2F0 54 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 OR2T8A6NH00 312 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 C15orf62A8K5M9 175 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 WRBO00258 174 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 OR2C1O95371 312 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 CLEC3BP05452 202 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 ID3Q02535 119 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 TATDN3Q17R31 274 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 VN1R17PQ8TDU5 208 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 CHRDL1Q9BU40 450 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 RETNQ9HD89 108 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 C21orf62Q9NYP8 219 aa11.12□□□□□ -0.63
NCK1-202ENST00000460960 RCL1Q9Y2P8 373 aaKnown RBP11.12□□□□□ -0.63
NCK1-202ENST00000460960 TRBV7-1A0A0A6YYK4 115 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 C5orf51A6NDU8 294 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 SNRPGP15A8MWD9 76 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 FAM90A26D6RGX4 464 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 H3BP45 60 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 SYNGR2O43760 224 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 SSSCA1O60232 199 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 PRAF2O60831 178 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 SCGB1D2O95969 90 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 MBPP02686 304 aaPredicted RBP11.11□□□□□ -0.63
NCK1-202ENST00000460960 NPY1RP25929 384 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 ADMP35318 185 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 ARL3P36405 182 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 HTR2BP41595 481 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 KLF5Q13887 457 aaPredicted RBP11.11□□□□□ -0.63
NCK1-202ENST00000460960 C2orf83Q53S99 150 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 UBAC2Q8NBM4 344 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 CXorf58Q96LI9 332 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 FAM110AQ9BQ89 295 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 GPN1Q9HCN4 374 aaPredicted RBP11.11□□□□□ -0.63
NCK1-202ENST00000460960 THYN1Q9P016 225 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 ALG5Q9Y673 324 aa11.11□□□□□ -0.63
NCK1-202ENST00000460960 C7orf66A4D0T2 115 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 A8MZ25 164 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 GOSR2O14653 212 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 IFNA10P01566 189 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 IGLV1-51P01701 117 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
NCK1-202ENST00000460960 PAX9P55771 341 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 IL15RAQ13261 267 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 GTSCR1Q86UQ5 136 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 OR1L6Q8NGR2 347 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 IL17DQ8TAD2 202 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 HIPK2Q9H2X6 1198 aa11.1□□□□□ -0.63
NCK1-202ENST00000460960 CYB5BO43169 146 aa11.09□□□□□ -0.63
NCK1-202ENST00000460960 CCNKO75909 580 aa11.09□□□□□ -0.63
NCK1-202ENST00000460960 ZP3P21754 424 aa11.09□□□□□ -0.63
NCK1-202ENST00000460960 SUB1P53999 127 aaKnown RBP eCLIP11.09□□□□□ -0.63
NCK1-202ENST00000460960 RGS21Q2M5E4 152 aa11.09□□□□□ -0.63
NCK1-202ENST00000460960 RPEL1Q2QD12 228 aa11.09□□□□□ -0.63
NCK1-202ENST00000460960 Q56UQ5 140 aa11.09□□□□□ -0.63
NCK1-202ENST00000460960 UNQ9165/PRO28630Q6UXU0 137 aa11.09□□□□□ -0.63
NCK1-202ENST00000460960 IL34Q6ZMJ4 242 aa11.09□□□□□ -0.63
NCK1-202ENST00000460960 C2orf50Q96LR7 162 aa11.09□□□□□ -0.63
NCK1-202ENST00000460960 IGHV3OR16-8A0A075B7F1 116 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 TGOLN2O43493 480 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 GGCTO75223 188 aaKnown RBP11.08□□□□□ -0.64
NCK1-202ENST00000460960 MED6O75586 246 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 CTSGP08311 255 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 OPRK1P41145 380 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 H2BFSP57053 126 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 OXA1LQ15070 435 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 GSG1LQ6UXU4 331 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 C11orf1Q9H5F2 150 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 CACFD1Q9UGQ2 172 aa11.08□□□□□ -0.64
NCK1-202ENST00000460960 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms