RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ARL9Q6T311 187 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 FGFRL1Q8N441 504 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 CHST4Q8NCG5 386 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 ZNF485Q8NCK3 441 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 Q8WTZ3 238 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 FCAMRQ8WWV6 532 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 PIGCQ92535 297 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 FRZBQ92765 325 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 ZNF488Q96MN9 340 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 PYGO2Q9BRQ0 406 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 CHRDL1Q9BU40 450 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 VAMP8Q9BV40 100 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 HINT2Q9BX68 163 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 WDR13Q9H1Z4 485 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 BEX1Q9HBH7 125 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 RAB9BQ9NP90 201 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 ZNF391Q9UJN7 358 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 JPT1Q9UK76 154 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 PIGLQ9Y2B2 252 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 AK6Q9Y3D8 172 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 WIPI2Q9Y4P8 454 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 R4GMQ9 66 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 URGCP-MRPS24S4R325 110 aa3.89□□□□□ -1.79
ATPAF1-203ENST00000460928 ANK2Q01484 3957 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 IGKV1-27A0A075B6S5 117 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 IGHV3OR15-7A0A075B7D8 119 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 IGHV4-61A0A0C4DH41 118 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 LOC107986453A0A1B0GWG9 222 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 IQCF6A8MYZ5 107 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 PRSS46E5RG02 174 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 F8WDY8 70 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 CLDN34H7C241 214 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 PDE6DO43924 150 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 DUS4LO95620 317 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 IGLV3-1P01715 115 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 TRGC2P03986 189 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 AKR1C4P17516 323 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 S100A7P31151 101 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 NKX2-1P43699 371 aaPredicted RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 GPR6P46095 362 aaPredicted RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 HNRNPA3P51991 378 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 RPL23AP62750 156 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 SRPXP78539 464 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 TNFAIP6P98066 277 aaPredicted RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 RUNX1Q01196 453 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 DHRS2Q13268 280 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 CLEC12BQ2HXU8 276 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 SOHLH1Q5JUK2 328 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 TPTE2P1Q5T6R2 138 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 FAM27D1Q5T7N8 215 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 TMEM42Q69YG0 159 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 DUX4L9Q6RFH8 374 aaPredicted RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 WDR82Q6UXN9 313 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 GTF2H5Q6ZYL4 71 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 C11orf53Q8IXP5 236 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 MMD2Q8IY49 270 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 DEFB108BQ8NET1 73 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 OR5AU1Q8NGC0 362 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 SECTM1Q8WVN6 248 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 CCL17Q92583 94 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 DYRK2Q92630 601 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 FGGYQ96C11 551 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 ADAT3Q96EY9 351 aaPredicted RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 C17orf77Q96MU5 243 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 AQP10Q96PS8 301 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 SPACA5Q96QH8 159 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 CITED1Q99966 193 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 NMES1Q9C002 83 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 TMEM231Q9H6L2 316 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 PATZ1Q9HBE1 687 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 TAF9BQ9HBM6 251 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 CYTL1Q9NRR1 136 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 INPP5EQ9NRR6 644 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 ZNF586Q9NXT0 402 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 MRPS28Q9Y2Q9 187 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 TMEM14AQ9Y6G1 99 aa3.88□□□□□ -1.79
ATPAF1-203ENST00000460928 TANC2Q9HCD6 1990 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 DOCK11Q5JSL3 2073 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 A0A096LNT2 108 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 IGKV1-9A0A0C4DH69 117 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 TRBV2A0A0J9YWF9 115 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 FBLL1A6NHQ2 334 aaKnown RBP3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 PIN1P1O15428 100 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 SYNGR1O43759 233 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 YPEL1O60688 119 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 HBZP02008 142 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 HSPB1P04792 205 aaKnown RBP3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 TYMSP04818 313 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 CXCL1P09341 107 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 NPBWR2P48146 333 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 GNG4P50150 75 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 GPM6AP51674 278 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 FUT6P51993 359 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 EFNA4P52798 201 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 UBE2MP61081 183 aaKnown RBP3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 RPS11P62280 158 aaKnown RBP eCLIP3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 PRB3Q04118 309 aaPredicted RBP3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 CDK5R1Q15078 307 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 OR8B8Q15620 311 aa3.87□□□□□ -1.79
ATPAF1-203ENST00000460928 IAH1Q2TAA2 248 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms