RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 FLVCR2Q9UPI3 526 aa10.26□□□□□ -0.77
SCAMP4-206ENST00000460767 C9orf170A2RU37 121 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 LYRM1O43325 122 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 MT-CO2P00403 227 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 ELLP55199 621 aaPredicted RBP10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 DHRS2Q13268 280 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 SMCO1Q147U7 214 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 C2orf83Q53S99 150 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 GTSCR1Q86UQ5 136 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 HAPLN4Q86UW8 402 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 OR2K2Q8NGT1 345 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 S100ZQ8WXG8 99 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 MRPL36Q9P0J6 103 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 PEMTQ9UBM1 199 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 TMED3Q9Y3Q3 217 aa10.25□□□□□ -0.77
SCAMP4-206ENST00000460767 IZUMO1RA6ND01 250 aa10.24□□□□□ -0.77
SCAMP4-206ENST00000460767 OR2T8A6NH00 312 aa10.24□□□□□ -0.77
SCAMP4-206ENST00000460767 FOLR2P14207 255 aa10.24□□□□□ -0.77
SCAMP4-206ENST00000460767 IFITM3Q01628 133 aa10.24□□□□□ -0.77
SCAMP4-206ENST00000460767 DEFB114Q30KQ6 69 aa10.24□□□□□ -0.77
SCAMP4-206ENST00000460767 OR10C1Q96KK4 312 aa10.24□□□□□ -0.77
SCAMP4-206ENST00000460767 FRAS1Q86XX4 4008 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 IGHV3-21A0A0B4J1V1 117 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 FAM90A26D6RGX4 464 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 CORTO00230 105 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 NDUFA4O00483 81 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 OR4E1P0C645 316 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 CBLN1P23435 193 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 VAMP1P23763 118 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 HTR2BP41595 481 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 FAM106AQ4KMX7 169 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 PLET1Q6UQ28 207 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 LYG2Q86SG7 212 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 RNASE11Q8TAA1 199 aaKnown RBP10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 PDCD10Q9BUL8 212 aa10.23□□□□□ -0.77
SCAMP4-206ENST00000460767 LINC00854A0A1B0GVQ3 168 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 ZNF785A8K8V0 405 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 CENPXA8MT69 81 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 K7EMT4 169 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 ANXA7P20073 488 aaKnown RBP10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 SNCAP37840 140 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 INPP1P49441 399 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 HOXA1P49639 335 aaPredicted RBP10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 MFAP4P55083 255 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 ASAH1Q13510 395 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 CD300EQ496F6 205 aaPredicted RBP10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 TM4SF20Q53R12 229 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 LCN12Q6JVE5 192 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 SLC24A4Q8NFF2 622 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 RNASEH2CQ8TDP1 164 aaKnown RBP10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 MITD1Q8WV92 249 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 CACNG8Q8WXS5 425 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 MARC2Q969Z3 335 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 MISP3Q96FF7 219 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 C20orf85Q9H1P6 137 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 TUBA4BQ9H853 241 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 RETNQ9HD89 108 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 TECRQ9NZ01 308 aaKnown RBP10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 MLXQ9UH92 298 aa10.22□□□□□ -0.77
SCAMP4-206ENST00000460767 UPK1BO75841 260 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 IGKV1-17P01599 117 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 IGHV3-48P01763 117 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 TCRBP04435 133 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 SUB1P53999 127 aaKnown RBP eCLIP10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 ATP5IP56385 69 aaPredicted RBP10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 MLANAQ16655 118 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 GGNBP1Q5YKI7 109 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 TMEM116Q8NCL8 245 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 OR4X1Q8NH49 305 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 RBKSQ9H477 322 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 ZFAND3Q9H8U3 227 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 MRPL27Q9P0M9 148 aaKnown RBP10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 U3KQ87 197 aa10.21□□□□□ -0.77
SCAMP4-206ENST00000460767 C15orf62A8K5M9 175 aa10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 MPTX1A8MV57 137 aa10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 TMEM50AO95807 157 aa10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 LY6G6CO95867 125 aa10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 ID3Q02535 119 aa10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 PRSS54Q6PEW0 395 aa10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 DTD1Q8TEA8 209 aa10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 WDR12Q9GZL7 423 aaKnown RBP10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 HEYLQ9NQ87 328 aaPredicted RBP10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 DAZ1Q9NQZ3 744 aaKnown RBP10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 UFC1Q9Y3C8 167 aa10.2□□□□□ -0.78
SCAMP4-206ENST00000460767 IGHV3-35A0A0C4DH35 117 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 NUPR2A6NF83 97 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 CEBPZOSA8MTT3 80 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 PRSS46E5RG02 174 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 CLN5O75503 358 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 ADAP1O75689 374 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 NXPH3O95157 252 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 NPY1RP25929 384 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 ZNF846Q147U1 533 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 Q56UQ5 140 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 UXS1Q8NBZ7 420 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 DUSP18Q8NEJ0 188 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 OR4D5Q8NGN0 318 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 PINX1Q96BK5 328 aaKnown RBP10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 FAM110AQ9BQ89 295 aa10.19□□□□□ -0.78
SCAMP4-206ENST00000460767 ENY2Q9NPA8 101 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms