RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 DUSP13Q9UII6 198 aa12.67□□□□□ -0.38
SSR4-206ENST00000460616 LOC102724200A0A096LPH7 203 aaPredicted RBP12.66□□□□□ -0.38
SSR4-206ENST00000460616 SH2D7A6NKC9 451 aaPredicted RBP12.66□□□□□ -0.38
SSR4-206ENST00000460616 C15orf61A6NNL5 157 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 SYS1-DBNDD2H3BUS1 97 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 SMPD2O60906 423 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 HSPE1P61604 102 aaKnown RBP12.66□□□□□ -0.38
SSR4-206ENST00000460616 MRPL49Q13405 166 aaKnown RBP12.66□□□□□ -0.38
SSR4-206ENST00000460616 FAM231DQ6ZW35 169 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 C11orf53Q8IXP5 236 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 NUDT11Q96G61 164 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 URB1-AS1Q96HZ7 61 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 HINT2Q9BX68 163 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 NCOR1P1Q9H4R4 102 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 MSRB2Q9Y3D2 182 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 HSBP1L1C9JCN9 74 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 J3QR06 171 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 CD5LO43866 347 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 IGHV3-13P01766 116 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 IGHV3-7P01780 117 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 SLC25A40Q8TBP6 338 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 C1RLQ9NZP8 487 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 CACNA1AO00555 2505 aa12.66□□□□□ -0.38
SSR4-206ENST00000460616 FNDC10F2Z333 226 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 REG1BP48304 166 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 EDDM3AQ14507 147 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 FAM120AOSQ5T036 256 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 FAM71F2Q6NXP2 309 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 C19orf24Q9BVV8 132 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 HIGD1CA8MV81 97 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 C8orf88P0DMB2 117 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 MOB3BQ86TA1 216 aa12.65□□□□□ -0.38
SSR4-206ENST00000460616 MGAQ8IWI9 3026 aa12.65□□□□□ -0.39
SSR4-206ENST00000460616 IGKV1OR2-108A0A075B7D4 117 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 IQCF6A8MYZ5 107 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 J3QW42 95 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 LEPROTL1O95214 131 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 LINC00173Q6ZV60 143 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 SMIM12Q96EX1 92 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
SSR4-206ENST00000460616 TMEM238C9JI98 176 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 KLK10O43240 276 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 CHRDL1Q9BU40 450 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 TMEM191AQ9H0A3 160 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 TMEM14BQ9NUH8 114 aa12.64□□□□□ -0.39
SSR4-206ENST00000460616 FOXA2Q9Y261 457 aaPredicted RBP12.64□□□□□ -0.39
SSR4-206ENST00000460616 CHD8Q9HCK8 2581 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 KIR2DS2P43631 304 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 ZNF134P52741 427 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 PRR31Q5SQ13 230 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 OR4S2Q8NH73 311 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 FAM173AQ9BQD7 235 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 SCRT2Q9NQ03 307 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 B4GALT7Q9UBV7 327 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 PEF1Q9UBV8 284 aaKnown RBP12.63□□□□□ -0.39
SSR4-206ENST00000460616 TRAV8-6A0A0B4J262 113 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 MYOD1P15172 320 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 MAGEA5P43359 124 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 C3AR1Q16581 482 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 ATP5L2Q7Z4Y8 100 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 MEGF9Q9H1U4 602 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 IDI2-AS1Q9NZ38 188 aa12.63□□□□□ -0.39
SSR4-206ENST00000460616 URB1O60287 2271 aaKnown RBP12.63□□□□□ -0.39
SSR4-206ENST00000460616 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.62□□□□□ -0.39
SSR4-206ENST00000460616 VWC2LB2RUY7 222 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 CORTO00230 105 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 HIST1H1EP10412 219 aaKnown RBP12.62□□□□□ -0.39
SSR4-206ENST00000460616 FOXA3P55318 350 aaPredicted RBP12.62□□□□□ -0.39
SSR4-206ENST00000460616 UBE2L3P68036 154 aaKnown RBP12.62□□□□□ -0.39
SSR4-206ENST00000460616 WDR82Q6UXN9 313 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 ZNF841Q6ZN19 808 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 FAM90A1Q86YD7 464 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 CHCHD1Q96BP2 118 aaKnown RBP12.62□□□□□ -0.39
SSR4-206ENST00000460616 JPT1Q9UK76 154 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 A0A087X0K7 114 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 TRAV5A0A0B4J249 113 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 MPV17P39210 176 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 SSX8Q7RTT4 187 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 OR51B2Q9Y5P1 312 aa12.62□□□□□ -0.39
SSR4-206ENST00000460616 HIST1H1AQ02539 215 aaPredicted RBP12.61□□□□□ -0.39
SSR4-206ENST00000460616 SMIM21Q3B7S5 101 aa12.61□□□□□ -0.39
SSR4-206ENST00000460616 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
SSR4-206ENST00000460616 KLF14Q8TD94 323 aaPredicted RBP12.61□□□□□ -0.39
SSR4-206ENST00000460616 DDB2Q92466 427 aa12.61□□□□□ -0.39
SSR4-206ENST00000460616 A0A1B0GXF2 115 aa12.61□□□□□ -0.39
SSR4-206ENST00000460616 IGLC1P0CG04 106 aa12.61□□□□□ -0.39
SSR4-206ENST00000460616 C1orf229Q6ZS94 237 aaPredicted RBP12.61□□□□□ -0.39
SSR4-206ENST00000460616 CD177Q8N6Q3 437 aa12.61□□□□□ -0.39
SSR4-206ENST00000460616 HES7Q9BYE0 225 aa12.61□□□□□ -0.39
SSR4-206ENST00000460616 CXXC4Q9H2H0 198 aa12.61□□□□□ -0.39
SSR4-206ENST00000460616 IFI27L2Q9H2X8 130 aa12.61□□□□□ -0.39
SSR4-206ENST00000460616 HCFC1P51610 2035 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 TET2Q6N021 2002 aaPredicted RBP12.6□□□□□ -0.39
SSR4-206ENST00000460616 HLA-DRB1P01911 266 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 MLANAQ16655 118 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms