RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 GPR61Q9BZJ8 451 aa17.24■□□□□ 0.35
C9orf3-209ENST00000460573 PPP5D1E7EU14 171 aa17.23■□□□□ 0.35
C9orf3-209ENST00000460573 PRB2P02812 416 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-209ENST00000460573 GPR183P32249 361 aa17.23■□□□□ 0.35
C9orf3-209ENST00000460573 NPBWR1P48145 328 aa17.23■□□□□ 0.35
C9orf3-209ENST00000460573 Q56UQ5 140 aa17.23■□□□□ 0.35
C9orf3-209ENST00000460573 OXLD1Q5BKU9 147 aa17.23■□□□□ 0.35
C9orf3-209ENST00000460573 TMEM170AQ8WVE7 144 aa17.23■□□□□ 0.35
C9orf3-209ENST00000460573 SMIM8Q96KF7 97 aa17.23■□□□□ 0.35
C9orf3-209ENST00000460573 GOSR2O14653 212 aa17.22■□□□□ 0.35
C9orf3-209ENST00000460573 TGOLN2O43493 480 aa17.22■□□□□ 0.35
C9orf3-209ENST00000460573 MBPP02686 304 aaPredicted RBP17.22■□□□□ 0.35
C9orf3-209ENST00000460573 SLC25A4P12235 298 aa17.22■□□□□ 0.35
C9orf3-209ENST00000460573 TAS2R30P59541 319 aa17.22■□□□□ 0.35
C9orf3-209ENST00000460573 CYCSP99999 105 aaKnown RBP17.22■□□□□ 0.35
C9orf3-209ENST00000460573 C11orf87Q6NUJ2 197 aa17.22■□□□□ 0.35
C9orf3-209ENST00000460573 GPHB5Q86YW7 130 aa17.22■□□□□ 0.35
C9orf3-209ENST00000460573 ALG5Q9Y673 324 aa17.22■□□□□ 0.35
C9orf3-209ENST00000460573 OR2T8A6NH00 312 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 F8W735 103 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-209ENST00000460573 SSSCA1O60232 199 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 IFNA4P05014 189 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 IL15RAQ13261 267 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 FAM106AQ4KMX7 169 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 ACSM6Q6P461 480 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 UBAC2Q8NBM4 344 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 MRAPQ8TCY5 172 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 NMES1Q9C002 83 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 FNDC4Q9H6D8 234 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-209ENST00000460573 PSENENQ9NZ42 101 aa17.21■□□□□ 0.35
C9orf3-209ENST00000460573 STRAPQ9Y3F4 350 aaKnown RBP17.21■□□□□ 0.35
C9orf3-209ENST00000460573 C15orf62A8K5M9 175 aa17.2■□□□□ 0.34
C9orf3-209ENST00000460573 GNG7O60262 68 aa17.2■□□□□ 0.34
C9orf3-209ENST00000460573 SCGB2A1O75556 95 aa17.2■□□□□ 0.34
C9orf3-209ENST00000460573 OR2C1O95371 312 aa17.2■□□□□ 0.34
C9orf3-209ENST00000460573 SPANXN5Q5MJ07 72 aa17.2■□□□□ 0.34
C9orf3-209ENST00000460573 OR4X1Q8NH49 305 aa17.2■□□□□ 0.34
C9orf3-209ENST00000460573 ELOVL1Q9BW60 279 aa17.2■□□□□ 0.34
C9orf3-209ENST00000460573 RCL1Q9Y2P8 373 aaKnown RBP17.2■□□□□ 0.34
C9orf3-209ENST00000460573 LGALS9O00182 355 aa17.19■□□□□ 0.34
C9orf3-209ENST00000460573 NUPL2O15504 423 aaKnown RBP17.19■□□□□ 0.34
C9orf3-209ENST00000460573 IGLL1P15814 213 aa17.19■□□□□ 0.34
C9orf3-209ENST00000460573 GPX4P36969 197 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-209ENST00000460573 INSL3P51460 131 aa17.19■□□□□ 0.34
C9orf3-209ENST00000460573 SYNJ2BPP57105 145 aa17.19■□□□□ 0.34
C9orf3-209ENST00000460573 CD69Q07108 199 aa17.19■□□□□ 0.34
C9orf3-209ENST00000460573 CACNG8Q8WXS5 425 aa17.19■□□□□ 0.34
C9orf3-209ENST00000460573 PEMTQ9UBM1 199 aa17.19■□□□□ 0.34
C9orf3-209ENST00000460573 TRAV30A0A087WSZ9 112 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 K7EPK0 472 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 TSC22D2O75157 780 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 CLN5O75503 358 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 SIX6O95475 246 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 IGHV3-48P01763 117 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 CTSGP08311 255 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 PVALBP20472 110 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-209ENST00000460573 KPRPQ5T749 579 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-209ENST00000460573 C9orf66Q5T8R8 295 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 TMEM116Q8NCL8 245 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 OR9G4Q8NGQ1 327 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 PAIP2BQ9ULR5 123 aaKnown RBP17.18■□□□□ 0.34
C9orf3-209ENST00000460573 LSM5Q9Y4Y9 91 aaKnown RBP17.18■□□□□ 0.34
C9orf3-209ENST00000460573 TGP01266 2768 aa17.18■□□□□ 0.34
C9orf3-209ENST00000460573 SEC14L6B5MCN3 397 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 L7N2F9 121 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 TMEM50AO95807 157 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 PAX9P55771 341 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 VAMP2P63027 116 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 RELQ04864 619 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-209ENST00000460573 MLANAQ16655 118 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 PRSS54Q6PEW0 395 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 OR4C12Q96R67 309 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 CHRDL1Q9BU40 450 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 ZNF436Q9C0F3 470 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-209ENST00000460573 ZC4H2Q9NQZ6 224 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 MGAT4CQ9UBM8 478 aa17.17■□□□□ 0.34
C9orf3-209ENST00000460573 NOTCH3Q9UM47 2321 aa17.16■□□□□ 0.34
C9orf3-209ENST00000460573 NDUFA4O00483 81 aa17.16■□□□□ 0.34
C9orf3-209ENST00000460573 ADMP35318 185 aa17.16■□□□□ 0.34
C9orf3-209ENST00000460573 RAB32Q13637 225 aa17.16■□□□□ 0.34
C9orf3-209ENST00000460573 SLC16A13Q7RTY0 426 aa17.16■□□□□ 0.34
C9orf3-209ENST00000460573 MED28Q9H204 178 aa17.16■□□□□ 0.34
C9orf3-209ENST00000460573 H3BP45 60 aa17.15■□□□□ 0.34
C9orf3-209ENST00000460573 RLN2P04090 185 aa17.15■□□□□ 0.34
C9orf3-209ENST00000460573 H2BFSP57053 126 aa17.15■□□□□ 0.34
C9orf3-209ENST00000460573 S100A10P60903 97 aa17.15■□□□□ 0.34
C9orf3-209ENST00000460573 RRAS2P62070 204 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-209ENST00000460573 NEURL2Q9BR09 285 aa17.15■□□□□ 0.34
C9orf3-209ENST00000460573 TMEM14EPQ6UXP3 125 aa17.14■□□□□ 0.33
C9orf3-209ENST00000460573 AKAP14Q86UN6 197 aa17.14■□□□□ 0.33
C9orf3-209ENST00000460573 SLC35E1Q96K37 410 aa17.14■□□□□ 0.33
C9orf3-209ENST00000460573 SIGLEC8Q9NYZ4 499 aa17.14■□□□□ 0.33
C9orf3-209ENST00000460573 MRPL36Q9P0J6 103 aaKnown RBP17.14■□□□□ 0.33
C9orf3-209ENST00000460573 ZMAT5Q9UDW3 170 aaKnown RBP17.14■□□□□ 0.33
C9orf3-209ENST00000460573 A8MWP6 167 aa17.13■□□□□ 0.33
C9orf3-209ENST00000460573 PRSS46E5RG02 174 aa17.13■□□□□ 0.33
C9orf3-209ENST00000460573 SAP30O75446 220 aa17.13■□□□□ 0.33
C9orf3-209ENST00000460573 SCAF4O95104 1147 aaKnown RBP17.13■□□□□ 0.33
C9orf3-209ENST00000460573 RND2P52198 227 aa17.13■□□□□ 0.33
C9orf3-209ENST00000460573 ELLP55199 621 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms